Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MIR376A1-201ENST00000616574 68 ntBASIC3.99□□□□□ -1.77
CNKSR3Q6P9H4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
CNKSR3Q6P9H4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.99□□□□□ -1.77
CNKSR3Q6P9H4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNKSR3Q6P9H4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNKSR3Q6P9H4 MTND5P9-201ENST00000503854 1755 ntBASIC3.99□□□□□ -1.77
CNKSR3Q6P9H4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 RNU6-682P-201ENST00000363843 106 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 MIR521-1-201ENST00000384902 87 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 AL160275.2-201ENST00000412010 394 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 AL513124.1-201ENST00000450410 614 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 RNU6-1037P-201ENST00000459571 107 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 RPL31P61-201ENST00000496160 376 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 RNU6-840P-201ENST00000517275 65 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 MED28P6-201ENST00000558776 231 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 MIR3690-201ENST00000580266 75 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 AC006077.1-201ENST00000604746 343 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 RMST_4.1-201ENST00000616886 107 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 MIR7154-201ENST00000620673 73 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 U6.92-201ENST00000636464 89 ntBASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CNKSR3Q6P9H4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 AP001148.1-201ENST00000624124 2359 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 DEFB108F-201ENST00000344638 222 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 SNORD50.1-201ENST00000362987 71 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 SNORA48.2-201ENST00000390926 124 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 RPS29P13-201ENST00000402041 169 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 LAP3P1-201ENST00000403648 294 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 RNA5SP129-201ENST00000410276 118 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 RPL26P6-201ENST00000440913 438 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 HIGD1AP2-201ENST00000446367 280 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 AC013470.1-201ENST00000453438 462 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 RPL30P10-201ENST00000488148 337 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 AC074198.2-201ENST00000508153 258 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 RNU2-27P-201ENST00000516185 142 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 SCARNA24.2-201ENST00000516968 130 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 AC087441.2-201ENST00000529141 262 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 SYF2P1-201ENST00000550658 413 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 AC090877.1-201ENST00000561418 344 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 AP002826.1-201ENST00000608835 315 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 Z99571.1-201ENST00000636677 394 ntBASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.97□□□□□ -1.77
CNKSR3Q6P9H4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CNKSR3Q6P9H4 LINC02555-201ENST00000563933 1951 ntBASIC3.96□□□□□ -1.77
CNKSR3Q6P9H4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CNKSR3Q6P9H4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 MIR411-201ENST00000362239 96 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 RNU5A-1-201ENST00000362698 116 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 Y_RNA.143-201ENST00000363520 106 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 Y_RNA.199-201ENST00000364014 102 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 SNORA38.1-201ENST00000364172 131 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 Y_RNA.439-201ENST00000384119 94 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AL592045.1-201ENST00000429867 352 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 HMGB1P27-201ENST00000431429 603 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 TMSB4XP3-201ENST00000445144 114 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 RNA5SP309-201ENST00000516670 106 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AL442163.3-201ENST00000554110 156 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 AC098826.3-201ENST00000603823 466 ntBASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.96□□□□□ -1.78
CNKSR3Q6P9H4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms