Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MIR4423-201ENST00000580922 80 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 AC010928.2-201ENST00000588017 287 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF43Q68DV7 AC008749.1-201ENST00000597650 306 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 AL161756.2-201ENST00000604597 246 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 AC131238.1-201ENST00000617135 328 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 CR392039.5-201ENST00000623201 510 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF43Q68DV7 MIR4496-201ENST00000635896 61 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
RNF43Q68DV7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNF43Q68DV7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNF43Q68DV7 FAM35DP-201ENST00000323387 2712 ntBASIC4.34□□□□□ -1.72
RNF43Q68DV7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
RNF43Q68DV7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
RNF43Q68DV7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF43Q68DV7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF43Q68DV7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF43Q68DV7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF43Q68DV7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
RNF43Q68DV7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF43Q68DV7 MIR410-201ENST00000362222 80 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 RNU5A-1-201ENST00000362698 116 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 RNU6-1249P-201ENST00000363237 111 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 RNA5SP322-201ENST00000363617 119 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 RNU6-153P-201ENST00000364422 104 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 SNORD14B-201ENST00000364533 90 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 Y_RNA.273-201ENST00000364703 102 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 RNU6-843P-201ENST00000384454 104 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 RNU6-882P-201ENST00000391025 103 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 OOSP1P1-201ENST00000423265 274 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 AC008065.1-201ENST00000428525 348 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF43Q68DV7 COX6B1P7-201ENST00000430845 235 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF43Q68DV7 UQCRBP2-201ENST00000447827 297 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF43Q68DV7 PRSS3P4-201ENST00000453323 162 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 AC087588.1-201ENST00000462203 316 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 AC073901.1-201ENST00000462471 408 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 AL160314.1-201ENST00000490836 438 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF43Q68DV7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF43Q68DV7 AK6P2-201ENST00000549020 471 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 AC067852.4-201ENST00000590314 478 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 RPL23AP88-201ENST00000605759 454 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 AC005828.6-201ENST00000606610 232 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 AC069200.1-201ENST00000609511 323 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 AC107294.1-201ENST00000609524 467 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF43Q68DV7 AC099506.2-201ENST00000623074 221 ntBASIC4.33□□□□□ -1.72
RNF43Q68DV7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RNF43Q68DV7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF43Q68DV7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF43Q68DV7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RNF43Q68DV7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RNF43Q68DV7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF43Q68DV7 RNU6-818P-201ENST00000364837 108 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 RNU4-9P-201ENST00000364951 139 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 MIR7-3-201ENST00000384898 110 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 RPL23AP48-201ENST00000406913 488 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 RNU6-257P-201ENST00000410238 98 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 SNORD12B-201ENST00000410433 91 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 AC024067.1-201ENST00000426199 223 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF43Q68DV7 RPS15AP7-201ENST00000439294 405 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 AC108145.1-201ENST00000503770 153 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 RNU6-919P-201ENST00000516731 104 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 AC084851.1-201ENST00000529105 249 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF43Q68DV7 RN7SL703P-201ENST00000578485 302 ntBASIC4.32□□□□□ -1.72
RNF43Q68DV7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF43Q68DV7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF43Q68DV7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF43Q68DV7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF43Q68DV7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF43Q68DV7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF43Q68DV7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RNF43Q68DV7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF43Q68DV7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RNF43Q68DV7 RNA5SP502-201ENST00000362694 119 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 RNU6-1167P-201ENST00000363227 94 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 RNA5SP130-201ENST00000364431 114 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 Y_RNA.262-201ENST00000364641 102 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 RNU1-89P-201ENST00000384592 164 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 MIR483-201ENST00000385070 76 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 MIR708-201ENST00000390708 88 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 MIR1250-201ENST00000408098 113 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 MIR1179-201ENST00000408703 91 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 SNORA3C-201ENST00000408792 125 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 Y_RNA.597-201ENST00000410463 100 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 AL513331.1-201ENST00000411908 397 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 AC009296.1-201ENST00000443146 155 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 MRPS10P1-201ENST00000448483 130 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 AL133547.1-201ENST00000448546 220 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF43Q68DV7 AC026726.1-201ENST00000512859 601 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 SNORD116-25-201ENST00000516517 92 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 AC022790.1-201ENST00000522872 204 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 345.1 ms