Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.95□□□□□ -2.26
HIST1H3AP68431 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
HIST1H3AP68431 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
HIST1H3AP68431 AL391987.6-201ENST00000305671 199 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 snoU2_19.1-201ENST00000362361 80 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 Y_RNA.140-201ENST00000363474 103 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 snoZ40.1-201ENST00000364540 72 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 MIR29B2-201ENST00000385055 81 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HIST1H3AP68431 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HIST1H3AP68431 CBX3P9-201ENST00000402326 552 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 RNU6-1025P-201ENST00000410629 104 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 AL953862.1-201ENST00000423016 168 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 UBE2D3P3-201ENST00000426992 425 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.94□□□□□ -2.26
HIST1H3AP68431 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.94□□□□□ -2.26
HIST1H3AP68431 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.94□□□□□ -2.26
HIST1H3AP68431 AL606517.1-201ENST00000446914 387 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 HMGN2P18-201ENST00000450680 270 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 MTND1P16-201ENST00000465177 898 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.94□□□□□ -2.26
HIST1H3AP68431 AC079140.2-201ENST00000506193 142 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HIST1H3AP68431 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HIST1H3AP68431 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.94□□□□□ -2.26
HIST1H3AP68431 MTND1P36-201ENST00000522384 936 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 AC026616.1-201ENST00000523157 525 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 AL356057.1-201ENST00000533798 831 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.94□□□□□ -2.26
HIST1H3AP68431 AC136618.2-201ENST00000575091 400 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 MIR3169-201ENST00000578032 83 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 AL358072.1-201ENST00000604156 575 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.94□□□□□ -2.26
HIST1H3AP68431 AC018926.1-201ENST00000616335 435 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 MIR1248-201ENST00000629190 106 ntBASIC0.94□□□□□ -2.26
HIST1H3AP68431 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HIST1H3AP68431 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.93□□□□□ -2.26
HIST1H3AP68431 RNA5SP327-201ENST00000362494 101 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 RNU6-212P-201ENST00000362642 104 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 Y_RNA.40-201ENST00000362645 93 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 RNU5B-4P-201ENST00000363508 111 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 MIR513A1-201ENST00000385138 129 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 RNU6-817P-201ENST00000391083 104 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 AL359704.1-201ENST00000411586 781 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.93□□□□□ -2.26
HIST1H3AP68431 AC009518.2-201ENST00000418056 731 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 AC092648.1-201ENST00000425870 423 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 Z82205.1-201ENST00000428456 297 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.93□□□□□ -2.26
HIST1H3AP68431 RPL30P12-201ENST00000474666 353 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 HMGB1P30-201ENST00000492455 606 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.93□□□□□ -2.26
HIST1H3AP68431 AC027338.1-201ENST00000514840 825 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.93□□□□□ -2.26
HIST1H3AP68431 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
HIST1H3AP68431 MIR3937-201ENST00000580135 106 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 AC078795.2-201ENST00000602835 1252 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 AC007363.1-201ENST00000604736 620 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 MIR6078-201ENST00000611069 100 ntBASIC0.93□□□□□ -2.26
HIST1H3AP68431 MIR302D-201ENST00000362275 68 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 RNU6-112P-201ENST00000363599 104 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 RNU4-51P-201ENST00000364206 140 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 SNORA62.1-201ENST00000364287 154 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 RNU6-278P-201ENST00000390945 109 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 MTCO1P17-201ENST00000411522 491 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 AC083875.1-201ENST00000419509 405 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.92□□□□□ -2.26
HIST1H3AP68431 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.92□□□□□ -2.26
HIST1H3AP68431 AC027119.1-201ENST00000440877 241 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 AP000542.1-201ENST00000448473 371 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 AL353752.1-201ENST00000454946 260 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.92□□□□□ -2.26
HIST1H3AP68431 RNU6-953P-201ENST00000459154 107 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 AC130509.1-201ENST00000464158 433 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.92□□□□□ -2.26
HIST1H3AP68431 AL136520.1-202ENST00000555494 763 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.92□□□□□ -2.26
HIST1H3AP68431 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 AC092140.2-201ENST00000618027 521 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 AC006927.2-201ENST00000639256 389 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 AL163152.1-201ENST00000642001 374 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 AC100821.1-201ENST00000523153 2479 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 MTND5P33-201ENST00000571250 1450 ntBASIC0.92□□□□□ -2.26
HIST1H3AP68431 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
HIST1H3AP68431 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
HIST1H3AP68431 MTND5P9-201ENST00000503854 1755 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 RNU6-487P-201ENST00000365430 104 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 FCF1P10-201ENST00000407590 479 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 Y_RNA.597-201ENST00000410463 100 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 RPL21P111-201ENST00000418453 477 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.91□□□□□ -2.26
HIST1H3AP68431 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.91□□□□□ -2.26
HIST1H3AP68431 JTBP1-201ENST00000441314 247 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 MTND2P4-201ENST00000445034 1004 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 GDI2P2-201ENST00000445131 608 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 ZNF886P-201ENST00000450781 723 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
HIST1H3AP68431 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.91□□□□□ -2.26
HIST1H3AP68431 RNU6-1315P-201ENST00000517187 99 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 258.6 ms