Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP46P62068 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.98□□□□□ -1.61
USP46P62068 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.98□□□□□ -1.61
USP46P62068 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
USP46P62068 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP46P62068 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP46P62068 RNU1-94P-201ENST00000362627 173 ntBASIC4.98□□□□□ -1.61
USP46P62068 RNA5SP515-201ENST00000364570 118 ntBASIC4.98□□□□□ -1.61
USP46P62068 SNORA70F-201ENST00000384142 135 ntBASIC4.98□□□□□ -1.61
USP46P62068 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.98□□□□□ -1.61
USP46P62068 RPL23AP58-201ENST00000440453 469 ntBASIC4.98□□□□□ -1.61
USP46P62068 EEF1B2P7-201ENST00000451177 676 ntBASIC4.98□□□□□ -1.61
USP46P62068 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.98□□□□□ -1.61
USP46P62068 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.98□□□□□ -1.61
USP46P62068 RPL31P41-201ENST00000477967 372 ntBASIC4.98□□□□□ -1.61
USP46P62068 NIP7P2-201ENST00000485801 544 ntBASIC4.98□□□□□ -1.61
USP46P62068 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.98□□□□□ -1.61
USP46P62068 SCARNA8-201ENST00000515924 131 ntBASIC4.98□□□□□ -1.61
USP46P62068 RNU1-6P-201ENST00000516290 144 ntBASIC4.98□□□□□ -1.61
USP46P62068 NACAP3-201ENST00000552100 481 ntBASIC4.98□□□□□ -1.61
USP46P62068 AL391813.1-201ENST00000603098 260 ntBASIC4.98□□□□□ -1.61
USP46P62068 MIR6798-201ENST00000612887 67 ntBASIC4.98□□□□□ -1.61
USP46P62068 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP46P62068 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP46P62068 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP46P62068 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP46P62068 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP46P62068 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
USP46P62068 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.97□□□□□ -1.61
USP46P62068 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.97□□□□□ -1.61
USP46P62068 AC022336.2-201ENST00000568966 2538 ntBASIC4.97□□□□□ -1.61
USP46P62068 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
USP46P62068 FAM35BP-202ENST00000497389 3337 ntBASIC4.97□□□□□ -1.61
USP46P62068 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.97□□□□□ -1.61
USP46P62068 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.97□□□□□ -1.61
USP46P62068 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.97□□□□□ -1.61
USP46P62068 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
USP46P62068 Z73965.1-201ENST00000623412 2297 ntBASIC4.97□□□□□ -1.61
USP46P62068 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP46P62068 RNU6-834P-201ENST00000362367 110 ntBASIC4.97□□□□□ -1.61
USP46P62068 RNU1-32P-201ENST00000363937 159 ntBASIC4.97□□□□□ -1.61
USP46P62068 RNU6-969P-201ENST00000383900 105 ntBASIC4.97□□□□□ -1.61
USP46P62068 SNORA72.4-201ENST00000384174 132 ntBASIC4.97□□□□□ -1.61
USP46P62068 MIR141-201ENST00000384975 95 ntBASIC4.97□□□□□ -1.61
USP46P62068 RNU6-460P-201ENST00000391158 108 ntBASIC4.97□□□□□ -1.61
USP46P62068 AL031003.1-201ENST00000404229 172 ntBASIC4.97□□□□□ -1.61
USP46P62068 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.97□□□□□ -1.61
USP46P62068 HMGN2P10-201ENST00000448085 265 ntBASIC4.97□□□□□ -1.61
USP46P62068 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.97□□□□□ -1.61
USP46P62068 RPL23AP70-201ENST00000483361 460 ntBASIC4.97□□□□□ -1.61
USP46P62068 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.97□□□□□ -1.61
USP46P62068 ACA59.2-201ENST00000517061 156 ntBASIC4.97□□□□□ -1.61
USP46P62068 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.97□□□□□ -1.61
USP46P62068 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.97□□□□□ -1.61
USP46P62068 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.97□□□□□ -1.61
USP46P62068 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.97□□□□□ -1.61
USP46P62068 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.97□□□□□ -1.61
USP46P62068 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.97□□□□□ -1.61
USP46P62068 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
USP46P62068 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP46P62068 AC106871.1-201ENST00000568324 3102 ntBASIC4.97□□□□□ -1.61
USP46P62068 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP46P62068 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
USP46P62068 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
USP46P62068 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.96□□□□□ -1.62
USP46P62068 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
USP46P62068 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP46P62068 RNU6-600P-201ENST00000362524 99 ntBASIC4.96□□□□□ -1.62
USP46P62068 RNU6-407P-201ENST00000365280 104 ntBASIC4.96□□□□□ -1.62
USP46P62068 RNU6-622P-201ENST00000384272 103 ntBASIC4.96□□□□□ -1.62
USP46P62068 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.96□□□□□ -1.62
USP46P62068 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.96□□□□□ -1.62
USP46P62068 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.96□□□□□ -1.62
USP46P62068 PDCD5P2-201ENST00000507570 312 ntBASIC4.96□□□□□ -1.62
USP46P62068 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.96□□□□□ -1.62
USP46P62068 AC021739.1-201ENST00000559631 174 ntBASIC4.96□□□□□ -1.62
USP46P62068 MIR3923-201ENST00000579521 83 ntBASIC4.96□□□□□ -1.62
USP46P62068 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.96□□□□□ -1.62
USP46P62068 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
USP46P62068 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP46P62068 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP46P62068 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
USP46P62068 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP46P62068 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.95□□□□□ -1.62
USP46P62068 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP46P62068 SALL4P2-201ENST00000423288 2910 ntBASIC4.95□□□□□ -1.62
USP46P62068 AL592182.3-201ENST00000642132 3304 ntBASIC4.95□□□□□ -1.62
USP46P62068 SNORD87-201ENST00000364849 89 ntBASIC4.95□□□□□ -1.62
USP46P62068 U1.1-201ENST00000384101 164 ntBASIC4.95□□□□□ -1.62
USP46P62068 AL590762.2-201ENST00000395798 571 ntBASIC4.95□□□□□ -1.62
USP46P62068 RNU6-855P-201ENST00000410395 104 ntBASIC4.95□□□□□ -1.62
USP46P62068 YPEL5P1-201ENST00000419731 367 ntBASIC4.95□□□□□ -1.62
USP46P62068 BPY2DP-201ENST00000422208 265 ntBASIC4.95□□□□□ -1.62
USP46P62068 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP46P62068 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.95□□□□□ -1.62
USP46P62068 RPL7AP28-201ENST00000464513 571 ntBASIC4.95□□□□□ -1.62
USP46P62068 AIG1P1-201ENST00000503376 148 ntBASIC4.95□□□□□ -1.62
USP46P62068 AC006499.6-201ENST00000511169 607 ntBASIC4.95□□□□□ -1.62
USP46P62068 LARP7P3-201ENST00000579888 337 ntBASIC4.95□□□□□ -1.62
USP46P62068 MIR8069-1-201ENST00000616627 86 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 278.4 ms