Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.91□□□□□ -2.26
AP3S2P59780 HMGB3P12-201ENST00000438745 556 ntBASIC0.91□□□□□ -2.26
AP3S2P59780 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.91□□□□□ -2.26
AP3S2P59780 AL353752.1-201ENST00000454946 260 ntBASIC0.91□□□□□ -2.26
AP3S2P59780 RNU6-333P-201ENST00000459117 107 ntBASIC0.91□□□□□ -2.26
AP3S2P59780 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.91□□□□□ -2.26
AP3S2P59780 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
AP3S2P59780 AC027338.1-201ENST00000514840 825 ntBASIC0.91□□□□□ -2.26
AP3S2P59780 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.91□□□□□ -2.26
AP3S2P59780 CR383656.8-201ENST00000549046 145 ntBASIC0.91□□□□□ -2.26
AP3S2P59780 AL136520.1-202ENST00000555494 763 ntBASIC0.91□□□□□ -2.26
AP3S2P59780 AC078795.2-201ENST00000602835 1252 ntBASIC0.91□□□□□ -2.26
AP3S2P59780 AC022022.2-201ENST00000602989 360 ntBASIC0.91□□□□□ -2.26
AP3S2P59780 AC006270.3-201ENST00000605967 1036 ntBASIC0.91□□□□□ -2.26
AP3S2P59780 MIR8065-201ENST00000620577 100 ntBASIC0.91□□□□□ -2.26
AP3S2P59780 AC022513.1-201ENST00000624512 117 ntBASIC0.91□□□□□ -2.26
AP3S2P59780 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.91□□□□□ -2.26
AP3S2P59780 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
AP3S2P59780 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
AP3S2P59780 RNU6-212P-201ENST00000362642 104 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 Y_RNA.111-201ENST00000363248 100 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 EBAG9P1-201ENST00000418955 543 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 AC083875.1-201ENST00000419509 405 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 AL953862.1-201ENST00000423016 168 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.9□□□□□ -2.27
AP3S2P59780 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.9□□□□□ -2.27
AP3S2P59780 AL022238.1-201ENST00000442557 355 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 AP000542.1-201ENST00000448473 371 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 OR2AQ1P-201ENST00000451972 200 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 AC114982.1-201ENST00000469402 321 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.9□□□□□ -2.27
AP3S2P59780 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.9□□□□□ -2.27
AP3S2P59780 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.9□□□□□ -2.27
AP3S2P59780 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
AP3S2P59780 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
AP3S2P59780 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.9□□□□□ -2.27
AP3S2P59780 AL157871.3-201ENST00000557231 293 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.9□□□□□ -2.27
AP3S2P59780 MIR5094-201ENST00000578766 85 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.9□□□□□ -2.27
AP3S2P59780 AC007363.1-201ENST00000604736 620 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 AP002802.2-201ENST00000605877 235 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 uc_338.12-201ENST00000616344 181 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 AL589994.2-201ENST00000621124 579 ntBASIC0.9□□□□□ -2.27
AP3S2P59780 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.9□□□□□ -2.27
AP3S2P59780 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
AP3S2P59780 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
AP3S2P59780 MTND5P33-201ENST00000571250 1450 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 RNU1-124P-201ENST00000363861 145 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 SNORD114-6-201ENST00000364393 72 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.89□□□□□ -2.27
AP3S2P59780 RNU6-968P-201ENST00000384076 107 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 RPL23AP32-201ENST00000395315 459 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 AL357139.1-201ENST00000407792 426 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.89□□□□□ -2.27
AP3S2P59780 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
AP3S2P59780 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.89□□□□□ -2.27
AP3S2P59780 C8orf59P1-201ENST00000429930 303 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.89□□□□□ -2.27
AP3S2P59780 RPS15AP10-201ENST00000432472 382 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.89□□□□□ -2.27
AP3S2P59780 KATNBL1P3-201ENST00000443475 909 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 RNU1-131P-201ENST00000458943 161 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.89□□□□□ -2.27
AP3S2P59780 SNORA3.4-201ENST00000515969 96 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.89□□□□□ -2.27
AP3S2P59780 AC087441.2-201ENST00000529141 262 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.89□□□□□ -2.27
AP3S2P59780 AC092325.1-201ENST00000566449 554 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 AP000654.2-201ENST00000605633 586 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 AC099785.1-201ENST00000605697 437 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 AC092140.2-201ENST00000618027 521 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 AC006927.2-201ENST00000639256 389 ntBASIC0.89□□□□□ -2.27
AP3S2P59780 Y_RNA.33-201ENST00000362591 102 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 RNU6-942P-201ENST00000363002 107 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 Y_RNA.534-201ENST00000384599 112 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 Y_RNA.578-201ENST00000390903 88 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 AL359704.1-201ENST00000411586 781 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 AC069282.1-201ENST00000411911 526 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.88□□□□□ -2.27
AP3S2P59780 BTF3P4-201ENST00000418852 495 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.88□□□□□ -2.27
AP3S2P59780 HSPE1P9-201ENST00000440046 311 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 RNA5SP269-201ENST00000459032 137 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 SNORD13-201ENST00000459299 104 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 AC116337.1-201ENST00000509680 687 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 SNORD116-28-201ENST00000516123 91 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.88□□□□□ -2.27
AP3S2P59780 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.88□□□□□ -2.27
AP3S2P59780 AC136932.1-201ENST00000574771 208 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.88□□□□□ -2.27
AP3S2P59780 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.88□□□□□ -2.27
AP3S2P59780 AC063943.3-201ENST00000615562 356 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 AC120349.3-201ENST00000624377 529 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 MTND5P35-201ENST00000557537 1720 ntBASIC0.88□□□□□ -2.27
AP3S2P59780 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
AP3S2P59780 SNORA4.3-201ENST00000365564 137 ntBASIC0.87□□□□□ -2.27
AP3S2P59780 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms