Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 SNORA67-201ENST00000384423 137 ntBASIC5.66□□□□□ -1.5
PSEN1P49768 Y_RNA.549-201ENST00000384657 102 ntBASIC5.66□□□□□ -1.5
PSEN1P49768 SNORA1.3-201ENST00000384676 136 ntBASIC5.66□□□□□ -1.5
PSEN1P49768 MIR891A-201ENST00000401237 79 ntBASIC5.66□□□□□ -1.5
PSEN1P49768 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.66□□□□□ -1.5
PSEN1P49768 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.66□□□□□ -1.5
PSEN1P49768 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.66□□□□□ -1.5
PSEN1P49768 AC092754.1-201ENST00000472975 479 ntBASIC5.66□□□□□ -1.5
PSEN1P49768 RPS29P20-201ENST00000489592 171 ntBASIC5.66□□□□□ -1.5
PSEN1P49768 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.66□□□□□ -1.5
PSEN1P49768 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PSEN1P49768 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PSEN1P49768 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PSEN1P49768 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.66□□□□□ -1.5
PSEN1P49768 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PSEN1P49768 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PSEN1P49768 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.65□□□□□ -1.5
PSEN1P49768 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PSEN1P49768 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PSEN1P49768 RNU4-15P-201ENST00000362613 141 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 Y_RNA.49-201ENST00000362714 112 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 SNORA70.6-201ENST00000383934 134 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 MIR450A2-201ENST00000385022 100 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 MIR195-201ENST00000385194 87 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 MIR223-201ENST00000385204 110 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PSEN1P49768 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.65□□□□□ -1.5
PSEN1P49768 BX510359.3-201ENST00000422168 306 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.65□□□□□ -1.5
PSEN1P49768 RN7SL172P-201ENST00000460535 303 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 AC010618.1-201ENST00000469924 477 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 AC091912.1-201ENST00000511351 248 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.65□□□□□ -1.5
PSEN1P49768 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
PSEN1P49768 RNU6-94P-201ENST00000607728 107 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 AC109583.2-201ENST00000617367 129 ntBASIC5.65□□□□□ -1.5
PSEN1P49768 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PSEN1P49768 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.65□□□□□ -1.51
PSEN1P49768 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PSEN1P49768 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.65□□□□□ -1.51
PSEN1P49768 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PSEN1P49768 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PSEN1P49768 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PSEN1P49768 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PSEN1P49768 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
PSEN1P49768 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.64□□□□□ -1.51
PSEN1P49768 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PSEN1P49768 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PSEN1P49768 RNU1-94P-201ENST00000362627 173 ntBASIC5.64□□□□□ -1.51
PSEN1P49768 Y_RNA.91-201ENST00000363042 107 ntBASIC5.64□□□□□ -1.51
PSEN1P49768 SNORA16A-201ENST00000384342 137 ntBASIC5.64□□□□□ -1.51
PSEN1P49768 MIR624-201ENST00000385217 97 ntBASIC5.64□□□□□ -1.51
PSEN1P49768 RNA5SP136-201ENST00000410906 107 ntBASIC5.64□□□□□ -1.51
PSEN1P49768 AC108075.1-201ENST00000424692 529 ntBASIC5.64□□□□□ -1.51
PSEN1P49768 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC5.64□□□□□ -1.51
PSEN1P49768 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.64□□□□□ -1.51
PSEN1P49768 RPL39P34-201ENST00000477141 156 ntBASIC5.64□□□□□ -1.51
PSEN1P49768 RNU6-1146P-201ENST00000516282 102 ntBASIC5.64□□□□□ -1.51
PSEN1P49768 MIR1269B-201ENST00000580405 75 ntBASIC5.64□□□□□ -1.51
PSEN1P49768 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PSEN1P49768 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PSEN1P49768 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PSEN1P49768 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.64□□□□□ -1.51
PSEN1P49768 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PSEN1P49768 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PSEN1P49768 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.63□□□□□ -1.51
PSEN1P49768 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PSEN1P49768 IL33-202ENST00000417746 2327 ntTSL 2 BASIC5.63□□□□□ -1.51
PSEN1P49768 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PSEN1P49768 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PSEN1P49768 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PSEN1P49768 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.63□□□□□ -1.51
PSEN1P49768 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.63□□□□□ -1.51
PSEN1P49768 RNA5SP502-201ENST00000362694 119 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 MIR124-3-201ENST00000384866 87 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 MIR29B2-201ENST00000385055 81 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PSEN1P49768 SNORD78.1-201ENST00000390866 65 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.63□□□□□ -1.51
PSEN1P49768 RNA5SP127-201ENST00000411051 133 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 RNU6-592P-201ENST00000411333 103 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 AL121890.1-201ENST00000435457 205 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 AF228730.3-201ENST00000436691 102 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 HMGN2P20-201ENST00000437531 273 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 AC010469.1-201ENST00000463864 576 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 AC083982.1-201ENST00000485679 344 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.63□□□□□ -1.51
PSEN1P49768 RNU6-1073P-201ENST00000517182 106 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 RN7SL435P-201ENST00000584418 282 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.63□□□□□ -1.51
PSEN1P49768 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.63□□□□□ -1.51
PSEN1P49768 FAM35BP-202ENST00000497389 3337 ntBASIC5.63□□□□□ -1.51
PSEN1P49768 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC5.63□□□□□ -1.51
PSEN1P49768 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.63□□□□□ -1.51
PSEN1P49768 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PSEN1P49768 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.62□□□□□ -1.51
PSEN1P49768 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PSEN1P49768 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PSEN1P49768 RNU6-600P-201ENST00000362524 99 ntBASIC5.62□□□□□ -1.51
PSEN1P49768 U3.3-201ENST00000362986 216 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms