Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 snoU13.23-201ENST00000458863 104 ntBASIC1.95□□□□□ -2.1
MMP11P24347 AC025033.1-201ENST00000463883 194 ntBASIC1.95□□□□□ -2.1
MMP11P24347 AC055731.1-201ENST00000474387 401 ntBASIC1.95□□□□□ -2.1
MMP11P24347 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.95□□□□□ -2.1
MMP11P24347 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.95□□□□□ -2.1
MMP11P24347 RPL38P4-201ENST00000502376 214 ntBASIC1.95□□□□□ -2.1
MMP11P24347 MTCYBP35-201ENST00000503630 1137 ntBASIC1.95□□□□□ -2.1
MMP11P24347 RBBP4P6-201ENST00000508098 202 ntBASIC1.95□□□□□ -2.1
MMP11P24347 RNU6-685P-201ENST00000517088 95 ntBASIC1.95□□□□□ -2.1
MMP11P24347 AC135279.1-201ENST00000543493 504 ntBASIC1.95□□□□□ -2.1
MMP11P24347 DEFB122-202ENST00000569013 197 ntBASIC1.95□□□□□ -2.1
MMP11P24347 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.95□□□□□ -2.1
MMP11P24347 MIR3915-201ENST00000578518 97 ntBASIC1.95□□□□□ -2.1
MMP11P24347 AC007229.1-201ENST00000590455 412 ntBASIC1.95□□□□□ -2.1
MMP11P24347 AC078899.2-201ENST00000595282 212 ntBASIC1.95□□□□□ -2.1
MMP11P24347 RPL30P11-203ENST00000598995 310 ntBASIC1.95□□□□□ -2.1
MMP11P24347 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.95□□□□□ -2.1
MMP11P24347 AC090578.1-201ENST00000604955 591 ntBASIC1.95□□□□□ -2.1
MMP11P24347 AL121992.2-201ENST00000606262 256 ntBASIC1.95□□□□□ -2.1
MMP11P24347 AP001486.3-201ENST00000615334 372 ntBASIC1.95□□□□□ -2.1
MMP11P24347 AP001506.1-201ENST00000615444 211 ntBASIC1.95□□□□□ -2.1
MMP11P24347 uc_338.15-201ENST00000615470 191 ntBASIC1.95□□□□□ -2.1
MMP11P24347 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MMP11P24347 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MMP11P24347 ZNF355P-201ENST00000427301 3216 ntBASIC1.94□□□□□ -2.1
MMP11P24347 SNORA51.11-201ENST00000384442 131 ntBASIC1.94□□□□□ -2.1
MMP11P24347 SNORD116-20-201ENST00000384529 92 ntBASIC1.94□□□□□ -2.1
MMP11P24347 MIR186-201ENST00000384988 86 ntBASIC1.94□□□□□ -2.1
MMP11P24347 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
MMP11P24347 HMGB3P2-201ENST00000411913 584 ntBASIC1.94□□□□□ -2.1
MMP11P24347 EEF1A1P40-201ENST00000412883 573 ntBASIC1.94□□□□□ -2.1
MMP11P24347 EDDM3CP-201ENST00000415977 425 ntBASIC1.94□□□□□ -2.1
MMP11P24347 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.94□□□□□ -2.1
MMP11P24347 CYCSP46-201ENST00000423569 204 ntBASIC1.94□□□□□ -2.1
MMP11P24347 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.94□□□□□ -2.1
MMP11P24347 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.94□□□□□ -2.1
MMP11P24347 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.94□□□□□ -2.1
MMP11P24347 MTATP6P16-201ENST00000434543 526 ntBASIC1.94□□□□□ -2.1
MMP11P24347 CALM1P1-201ENST00000442082 433 ntBASIC1.94□□□□□ -2.1
MMP11P24347 AL360271.2-201ENST00000447710 161 ntBASIC1.94□□□□□ -2.1
MMP11P24347 AC104058.1-201ENST00000448028 297 ntBASIC1.94□□□□□ -2.1
MMP11P24347 Y_RNA.687-201ENST00000516558 91 ntBASIC1.94□□□□□ -2.1
MMP11P24347 RNU6-1220P-201ENST00000517126 108 ntBASIC1.94□□□□□ -2.1
MMP11P24347 AC090572.1-201ENST00000519251 160 ntBASIC1.94□□□□□ -2.1
MMP11P24347 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
MMP11P24347 LRRC34P1-201ENST00000542742 915 ntBASIC1.94□□□□□ -2.1
MMP11P24347 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.94□□□□□ -2.1
MMP11P24347 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.94□□□□□ -2.1
MMP11P24347 MTCYBP33-201ENST00000575007 1130 ntBASIC1.94□□□□□ -2.1
MMP11P24347 AC098614.4-201ENST00000607601 462 ntBASIC1.94□□□□□ -2.1
MMP11P24347 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
MMP11P24347 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MMP11P24347 RNU6-371P-201ENST00000364283 108 ntBASIC1.93□□□□□ -2.1
MMP11P24347 RNU4-52P-201ENST00000384209 138 ntBASIC1.93□□□□□ -2.1
MMP11P24347 SNORA40.3-201ENST00000390964 122 ntBASIC1.93□□□□□ -2.1
MMP11P24347 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.93□□□□□ -2.1
MMP11P24347 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.93□□□□□ -2.1
MMP11P24347 RPL21P90-201ENST00000415692 466 ntBASIC1.93□□□□□ -2.1
MMP11P24347 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.93□□□□□ -2.1
MMP11P24347 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.93□□□□□ -2.1
MMP11P24347 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.93□□□□□ -2.1
MMP11P24347 GPR143P-201ENST00000434155 205 ntBASIC1.93□□□□□ -2.1
MMP11P24347 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.93□□□□□ -2.1
MMP11P24347 RPL23AP42-201ENST00000471152 471 ntBASIC1.93□□□□□ -2.1
MMP11P24347 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.93□□□□□ -2.1
MMP11P24347 RNU2-53P-201ENST00000516257 147 ntBASIC1.93□□□□□ -2.1
MMP11P24347 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
MMP11P24347 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
MMP11P24347 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
MMP11P24347 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.93□□□□□ -2.1
MMP11P24347 AP003072.2-201ENST00000527756 676 ntBASIC1.93□□□□□ -2.1
MMP11P24347 AC098848.2-201ENST00000588023 330 ntBASIC1.93□□□□□ -2.1
MMP11P24347 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.93□□□□□ -2.1
MMP11P24347 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.93□□□□□ -2.1
MMP11P24347 U6.114-201ENST00000636407 96 ntBASIC1.93□□□□□ -2.1
MMP11P24347 AC241585.2-209ENST00000638217 143 ntBASIC1.93□□□□□ -2.1
MMP11P24347 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
MMP11P24347 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MMP11P24347 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
MMP11P24347 AC002543.1-201ENST00000299783 1954 ntBASIC1.92□□□□□ -2.1
MMP11P24347 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
MMP11P24347 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.92□□□□□ -2.1
MMP11P24347 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MMP11P24347 RNU6-529P-201ENST00000363383 104 ntBASIC1.92□□□□□ -2.1
MMP11P24347 RNU4-91P-201ENST00000364778 135 ntBASIC1.92□□□□□ -2.1
MMP11P24347 RNU6-384P-201ENST00000364900 104 ntBASIC1.92□□□□□ -2.1
MMP11P24347 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
MMP11P24347 RNU6-622P-201ENST00000384272 103 ntBASIC1.92□□□□□ -2.1
MMP11P24347 MT-TH-201ENST00000387441 69 ntBASIC1.92□□□□□ -2.1
MMP11P24347 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.92□□□□□ -2.1
MMP11P24347 RNA5SP390-201ENST00000410191 113 ntBASIC1.92□□□□□ -2.1
MMP11P24347 AL356379.1-201ENST00000414105 126 ntBASIC1.92□□□□□ -2.1
MMP11P24347 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.92□□□□□ -2.1
MMP11P24347 AC008267.5-201ENST00000424928 265 ntBASIC1.92□□□□□ -2.1
MMP11P24347 AL591806.2-201ENST00000433122 173 ntBASIC1.92□□□□□ -2.1
MMP11P24347 MTCO3P5-201ENST00000433620 714 ntBASIC1.92□□□□□ -2.1
MMP11P24347 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.92□□□□□ -2.1
MMP11P24347 AC009961.2-201ENST00000435771 251 ntBASIC1.92□□□□□ -2.1
MMP11P24347 AC107032.1-201ENST00000485945 480 ntBASIC1.92□□□□□ -2.1
MMP11P24347 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms