Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF40O75150 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF40O75150 SNRPGP7-201ENST00000469016 106 ntBASIC5.21□□□□□ -1.58
RNF40O75150 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF40O75150 RN7SL481P-201ENST00000477764 299 ntBASIC5.21□□□□□ -1.58
RNF40O75150 RPL31P61-201ENST00000496160 376 ntBASIC5.21□□□□□ -1.58
RNF40O75150 MLLT10P2-201ENST00000506434 249 ntBASIC5.21□□□□□ -1.58
RNF40O75150 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.21□□□□□ -1.58
RNF40O75150 Y_RNA.677-201ENST00000516401 85 ntBASIC5.21□□□□□ -1.58
RNF40O75150 RNA5SP43-201ENST00000516559 110 ntBASIC5.21□□□□□ -1.58
RNF40O75150 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF40O75150 CR383656.8-201ENST00000549046 145 ntBASIC5.21□□□□□ -1.58
RNF40O75150 AC105254.2-201ENST00000603636 436 ntBASIC5.21□□□□□ -1.58
RNF40O75150 MIR7641-1-201ENST00000627518 61 ntBASIC5.21□□□□□ -1.58
RNF40O75150 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF40O75150 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF40O75150 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF40O75150 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF40O75150 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF40O75150 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
RNF40O75150 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF40O75150 RNU1-62P-201ENST00000362599 164 ntBASIC5.2□□□□□ -1.58
RNF40O75150 RNU1-94P-201ENST00000362627 173 ntBASIC5.2□□□□□ -1.58
RNF40O75150 RNU6-728P-201ENST00000365375 104 ntBASIC5.2□□□□□ -1.58
RNF40O75150 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF40O75150 Y_RNA.521-201ENST00000384560 114 ntBASIC5.2□□□□□ -1.58
RNF40O75150 SNORA12.1-201ENST00000390873 148 ntBASIC5.2□□□□□ -1.58
RNF40O75150 MIR1290-201ENST00000408735 78 ntBASIC5.2□□□□□ -1.58
RNF40O75150 RNA5SP146-201ENST00000410743 123 ntBASIC5.2□□□□□ -1.58
RNF40O75150 EIF4HP2-201ENST00000424380 563 ntBASIC5.2□□□□□ -1.58
RNF40O75150 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF40O75150 AL158147.1-201ENST00000443970 75 ntBASIC5.2□□□□□ -1.58
RNF40O75150 AC009963.2-201ENST00000453431 138 ntBASIC5.2□□□□□ -1.58
RNF40O75150 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF40O75150 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF40O75150 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF40O75150 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF40O75150 AL359198.2-201ENST00000611836 194 ntBASIC5.2□□□□□ -1.58
RNF40O75150 MIR7703-201ENST00000620784 77 ntBASIC5.2□□□□□ -1.58
RNF40O75150 DHX9P1-201ENST00000436565 3076 ntBASIC5.2□□□□□ -1.58
RNF40O75150 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF40O75150 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RNF40O75150 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF40O75150 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF40O75150 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF40O75150 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
RNF40O75150 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF40O75150 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF40O75150 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
RNF40O75150 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF40O75150 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF40O75150 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF40O75150 SDAD1P1-202ENST00000524156 2051 ntBASIC5.19□□□□□ -1.58
RNF40O75150 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF40O75150 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF40O75150 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF40O75150 RNU6-727P-201ENST00000363592 107 ntBASIC5.19□□□□□ -1.58
RNF40O75150 RNU1-32P-201ENST00000363937 159 ntBASIC5.19□□□□□ -1.58
RNF40O75150 RNA5SP505-201ENST00000364748 108 ntBASIC5.19□□□□□ -1.58
RNF40O75150 RNU1-100P-201ENST00000365255 165 ntBASIC5.19□□□□□ -1.58
RNF40O75150 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF40O75150 AC006028.1-201ENST00000438379 402 ntBASIC5.19□□□□□ -1.58
RNF40O75150 RPS26P2-201ENST00000440331 348 ntBASIC5.19□□□□□ -1.58
RNF40O75150 AC073264.2-201ENST00000448886 166 ntBASIC5.19□□□□□ -1.58
RNF40O75150 RN7SL319P-201ENST00000480656 221 ntBASIC5.19□□□□□ -1.58
RNF40O75150 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF40O75150 MIR3667-201ENST00000581025 74 ntBASIC5.19□□□□□ -1.58
RNF40O75150 AC005086.4-201ENST00000623065 213 ntBASIC5.19□□□□□ -1.58
RNF40O75150 CR381572.2-201ENST00000624852 397 ntBASIC5.19□□□□□ -1.58
RNF40O75150 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
RNF40O75150 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF40O75150 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF40O75150 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RNF40O75150 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF40O75150 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF40O75150 AC092435.4-201ENST00000623012 4159 ntBASIC5.19□□□□□ -1.58
RNF40O75150 AC015813.6-201ENST00000624409 5808 ntBASIC5.19□□□□□ -1.58
RNF40O75150 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RNF40O75150 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF40O75150 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF40O75150 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF40O75150 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF40O75150 Y_RNA.361-201ENST00000365515 120 ntBASIC5.18□□□□□ -1.58
RNF40O75150 SNORA20B-201ENST00000384220 132 ntBASIC5.18□□□□□ -1.58
RNF40O75150 Y_RNA.584-201ENST00000391090 114 ntBASIC5.18□□□□□ -1.58
RNF40O75150 RPS16P5-201ENST00000406501 404 ntBASIC5.18□□□□□ -1.58
RNF40O75150 RNY4P30-201ENST00000410216 95 ntBASIC5.18□□□□□ -1.58
RNF40O75150 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF40O75150 AC244670.1-201ENST00000436879 112 ntBASIC5.18□□□□□ -1.58
RNF40O75150 SNORA31.20-201ENST00000517111 133 ntBASIC5.18□□□□□ -1.58
RNF40O75150 SNORA31.23-201ENST00000517219 133 ntBASIC5.18□□□□□ -1.58
RNF40O75150 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF40O75150 AP006289.1-201ENST00000538089 277 ntBASIC5.18□□□□□ -1.58
RNF40O75150 AC006199.1-201ENST00000548728 219 ntBASIC5.18□□□□□ -1.58
RNF40O75150 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF40O75150 IPO5P1-202ENST00000600039 287 ntBASIC5.18□□□□□ -1.58
RNF40O75150 AC120024.3-201ENST00000603167 156 ntBASIC5.18□□□□□ -1.58
RNF40O75150 AC091979.2-201ENST00000607514 214 ntBASIC5.18□□□□□ -1.58
RNF40O75150 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF40O75150 AC004832.5-201ENST00000608677 401 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms