Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 AC008155.2-201ENST00000464337 397 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 RPS29P2-201ENST00000479278 136 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 RNA5SP384-201ENST00000516615 116 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 KLKP1-201ENST00000595979 403 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 AC078795.3-201ENST00000602913 472 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 AL391813.1-201ENST00000603098 260 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 AP001836.1-201ENST00000604675 523 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 UCA1.1-201ENST00000620952 75 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 AC002064.3-201ENST00000623448 346 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 AC008669.1-201ENST00000565823 2178 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 MAPK10-322ENST00000641485 4530 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 HAUS6P2-201ENST00000433254 2404 ntBASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 MIR369-201ENST00000362155 70 ntBASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 RNU4-35P-201ENST00000362588 141 ntBASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 Y_RNA.123-201ENST00000363338 102 ntBASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 AP000275.1-201ENST00000411943 390 ntBASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 AC007969.2-201ENST00000441891 191 ntBASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 MIR2053-201ENST00000459295 91 ntBASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 RPS29P27-201ENST00000463711 170 ntBASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 AC005899.2-201ENST00000584353 90 ntBASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 HMGB1P24-202ENST00000615653 685 ntBASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 U4.6-201ENST00000621618 127 ntBASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.13□□□□□ -1.91
MBD3L4A6NDZ8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 RNU6-596P-201ENST00000365395 98 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 RNU6-487P-201ENST00000365430 104 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 SNORD17-201ENST00000390930 237 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 SNORA75.6-201ENST00000391318 127 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 RNU6-174P-201ENST00000410406 106 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 RNU6-1140P-201ENST00000410517 106 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 AL354751.2-201ENST00000415471 210 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 BX276092.3-201ENST00000424182 230 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 AP001324.2-201ENST00000461163 319 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 RPL21P10-201ENST00000463521 490 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 RN7SL594P-201ENST00000470590 287 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 AC025518.1-201ENST00000479856 347 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 AP001025.1-201ENST00000486139 332 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 BTF3L4P4-201ENST00000506381 449 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 MAPK10-253ENST00000641010 4072 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 GABRG2-229ENST00000641017 3628 ntBASIC3.12□□□□□ -1.91
MBD3L4A6NDZ8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 Y_RNA.48-201ENST00000362710 103 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 Y_RNA.138-201ENST00000363462 102 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 SNORA48.2-201ENST00000390926 124 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 HMGN2P8-201ENST00000391458 268 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 AL591034.2-201ENST00000402839 359 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 MIR1302-11-201ENST00000408051 138 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 MIR1302-9-201ENST00000408365 138 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 MIR1302-10-201ENST00000408734 138 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 RNA5SP120-201ENST00000410900 112 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 AC096664.2-201ENST00000411843 406 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 AC138623.1-201ENST00000418060 216 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 AC006989.1-201ENST00000427212 131 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 AC004383.1-201ENST00000438135 289 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 OSTCP8-201ENST00000445117 448 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 RPL30P12-201ENST00000474666 353 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 AC097462.2-201ENST00000504623 481 ntBASIC3.11□□□□□ -1.91
MBD3L4A6NDZ8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms