Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX11Q9Y5W9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX11Q9Y5W9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX11Q9Y5W9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX11Q9Y5W9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX11Q9Y5W9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX11Q9Y5W9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX11Q9Y5W9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX11Q9Y5W9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX11Q9Y5W9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX11Q9Y5W9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 AL450487.1-201ENST00000426799 995 ntBASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 CLEC4GP1-201ENST00000596555 870 ntBASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 HYMAI.1-201ENST00000620949 238 ntBASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX11Q9Y5W9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 STARP1-201ENST00000397973 869 ntBASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 LINC01311-201ENST00000565162 1445 ntBASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX11Q9Y5W9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 MIR4674-201ENST00000582457 87 ntBASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX11Q9Y5W9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 SPDYE15P-201ENST00000424157 909 ntBASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 AL158211.5-201ENST00000623583 2518 ntBASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms