Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 TERF1P1-201ENST00000311003 1181 ntBASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 KRT18P22-201ENST00000402024 1347 ntBASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGA4Q9Y5G9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 AL390955.1-201ENST00000428694 934 ntBASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 AL137013.1-201ENST00000432946 1228 ntBASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PCDHGA4Q9Y5G9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 TUBB8P6-201ENST00000436895 1288 ntBASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 CYP2D8P-201ENST00000433633 1490 ntBASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA4Q9Y5G9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 FITM1-202ENST00000559294 800 ntBASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA4Q9Y5G9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms