Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 CR392000.1-201ENST00000624770 1228 ntBASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 AC083906.6-201ENST00000641366 219 ntBASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 RCC2P6-201ENST00000526625 1557 ntBASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS9D1Q9Y2B5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 AP001412.1-201ENST00000608405 714 ntBASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 AC093525.10-201ENST00000625130 1569 ntBASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 AC093503.3-201ENST00000624917 2352 ntBASIC18.88■□□□□ 0.61
VPS9D1Q9Y2B5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 PRORSD1P-201ENST00000295112 541 ntBASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 CROCCP3-202ENST00000420820 1947 ntBASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 UBE2SP1-201ENST00000450587 669 ntBASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 AC142381.4-202ENST00000563973 229 ntBASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 AC004408.2-201ENST00000623613 2777 ntBASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.87■□□□□ 0.61
VPS9D1Q9Y2B5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 Z98044.1-201ENST00000632503 1764 ntBASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 KRT8P11-201ENST00000409686 1436 ntBASIC18.86■□□□□ 0.61
VPS9D1Q9Y2B5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms