Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN1Q9UMX0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 DUX4L26-201ENST00000489078 1255 ntBASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 GPAT2P1-201ENST00000444924 1672 ntBASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.38■□□□□ 0.85
UBQLN1Q9UMX0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 AC117947.1-201ENST00000427448 529 ntBASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 COX11P1-201ENST00000489116 835 ntBASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.37■□□□□ 0.85
UBQLN1Q9UMX0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 AL023284.2-201ENST00000405850 579 ntBASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 AK4P3-201ENST00000418260 669 ntBASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 AC139887.4-201ENST00000607877 719 ntBASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 AL590326.2-201ENST00000625139 305 ntBASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN1Q9UMX0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms