Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RIMBP3Q9UFD9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
RIMBP3Q9UFD9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
RIMBP3Q9UFD9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC30.25■■■□□ 2.43
RIMBP3Q9UFD9 AP002472.1-201ENST00000577490 586 ntBASIC30.25■■■□□ 2.43
RIMBP3Q9UFD9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RIMBP3Q9UFD9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC30.25■■■□□ 2.43
RIMBP3Q9UFD9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC30.25■■■□□ 2.43
RIMBP3Q9UFD9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 AC027612.4-201ENST00000605371 583 ntBASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC30.24■■■□□ 2.43
RIMBP3Q9UFD9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RIMBP3Q9UFD9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RIMBP3Q9UFD9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RIMBP3Q9UFD9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC30.23■■■□□ 2.43
RIMBP3Q9UFD9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC30.23■■■□□ 2.43
RIMBP3Q9UFD9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC30.23■■■□□ 2.43
RIMBP3Q9UFD9 AC005336.2-201ENST00000593183 939 ntBASIC30.23■■■□□ 2.43
RIMBP3Q9UFD9 MTDHP3-201ENST00000594186 672 ntBASIC30.23■■■□□ 2.43
RIMBP3Q9UFD9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC30.23■■■□□ 2.43
RIMBP3Q9UFD9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC30.23■■■□□ 2.43
RIMBP3Q9UFD9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RIMBP3Q9UFD9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 SNHG9-202ENST00000564014 471 ntBASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 COPE-202ENST00000349893 948 ntTSL 2 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 AC010240.3-201ENST00000607688 395 ntBASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC30.22■■■□□ 2.43
RIMBP3Q9UFD9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 HLA-J-201ENST00000462773 1622 ntBASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 HLA-V-201ENST00000429037 534 ntBASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 MCCD1P1-208ENST00000445732 328 ntBASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC30.21■■■□□ 2.43
RIMBP3Q9UFD9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 KRT8P3-201ENST00000519669 1449 ntBASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 AC138761.1-201ENST00000584393 385 ntBASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC30.2■■■□□ 2.43
RIMBP3Q9UFD9 AC121338.2-201ENST00000622535 1744 ntBASIC30.2■■■□□ 2.42
RIMBP3Q9UFD9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
RIMBP3Q9UFD9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RIMBP3Q9UFD9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RIMBP3Q9UFD9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC30.19■■■□□ 2.42
RIMBP3Q9UFD9 AC005034.1-201ENST00000426657 489 ntBASIC30.19■■■□□ 2.42
RIMBP3Q9UFD9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC30.19■■■□□ 2.42
RIMBP3Q9UFD9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
RIMBP3Q9UFD9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC30.19■■■□□ 2.42
RIMBP3Q9UFD9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RIMBP3Q9UFD9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms