Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.22■□□□□ 0.67
HACD3Q9P035 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.22■□□□□ 0.67
HACD3Q9P035 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HACD3Q9P035 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HACD3Q9P035 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HACD3Q9P035 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HACD3Q9P035 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HACD3Q9P035 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HACD3Q9P035 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.21■□□□□ 0.67
HACD3Q9P035 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HACD3Q9P035 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HACD3Q9P035 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HACD3Q9P035 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HACD3Q9P035 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.21■□□□□ 0.67
HACD3Q9P035 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HACD3Q9P035 NUDT16P1-203ENST00000513809 620 ntBASIC19.21■□□□□ 0.67
HACD3Q9P035 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HACD3Q9P035 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.21■□□□□ 0.67
HACD3Q9P035 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.21■□□□□ 0.67
HACD3Q9P035 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HACD3Q9P035 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
HACD3Q9P035 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.21■□□□□ 0.67
HACD3Q9P035 MIR6786-201ENST00000616843 113 ntBASIC19.21■□□□□ 0.67
HACD3Q9P035 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.21■□□□□ 0.67
HACD3Q9P035 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.21■□□□□ 0.67
HACD3Q9P035 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HACD3Q9P035 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HACD3Q9P035 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HACD3Q9P035 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HACD3Q9P035 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HACD3Q9P035 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HACD3Q9P035 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HACD3Q9P035 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.21■□□□□ 0.67
HACD3Q9P035 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HACD3Q9P035 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HACD3Q9P035 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.2■□□□□ 0.66
HACD3Q9P035 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
HACD3Q9P035 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HACD3Q9P035 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HACD3Q9P035 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HACD3Q9P035 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HACD3Q9P035 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HACD3Q9P035 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HACD3Q9P035 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
HACD3Q9P035 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HACD3Q9P035 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HACD3Q9P035 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HACD3Q9P035 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.2■□□□□ 0.66
HACD3Q9P035 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HACD3Q9P035 PRSS44-201ENST00000515154 1146 ntBASIC19.2■□□□□ 0.66
HACD3Q9P035 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.2■□□□□ 0.66
HACD3Q9P035 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HACD3Q9P035 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.2■□□□□ 0.66
HACD3Q9P035 AC011298.2-201ENST00000617989 482 ntBASIC19.2■□□□□ 0.66
HACD3Q9P035 AC020763.4-201ENST00000623414 4170 ntBASIC19.2■□□□□ 0.66
HACD3Q9P035 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HACD3Q9P035 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HACD3Q9P035 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.19■□□□□ 0.66
HACD3Q9P035 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HACD3Q9P035 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.19■□□□□ 0.66
HACD3Q9P035 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HACD3Q9P035 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.19■□□□□ 0.66
HACD3Q9P035 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.19■□□□□ 0.66
HACD3Q9P035 TSPY23P-201ENST00000440136 739 ntBASIC19.19■□□□□ 0.66
HACD3Q9P035 B3GAT3P1-201ENST00000471720 806 ntBASIC19.19■□□□□ 0.66
HACD3Q9P035 AC091390.4-202ENST00000476426 537 ntBASIC19.19■□□□□ 0.66
HACD3Q9P035 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 AC116562.2-201ENST00000507042 360 ntBASIC19.19■□□□□ 0.66
HACD3Q9P035 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.19■□□□□ 0.66
HACD3Q9P035 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.19■□□□□ 0.66
HACD3Q9P035 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.19■□□□□ 0.66
HACD3Q9P035 AC130371.2-201ENST00000619443 611 ntBASIC19.19■□□□□ 0.66
HACD3Q9P035 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.19■□□□□ 0.66
HACD3Q9P035 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HACD3Q9P035 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.19■□□□□ 0.66
HACD3Q9P035 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.19■□□□□ 0.66
HACD3Q9P035 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
HACD3Q9P035 FP475955.4-201ENST00000623131 1990 ntBASIC19.19■□□□□ 0.66
HACD3Q9P035 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HACD3Q9P035 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HACD3Q9P035 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.19■□□□□ 0.66
HACD3Q9P035 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.18■□□□□ 0.66
HACD3Q9P035 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms