Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 AC106820.2-201ENST00000563775 3264 ntBASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 CYP2T3P-201ENST00000601990 817 ntBASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGAP3Q9NP61 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 MCRIP2P1-201ENST00000394346 511 ntBASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGAP3Q9NP61 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 LSM12P1-201ENST00000411836 588 ntBASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 AC142086.2-201ENST00000569753 217 ntBASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.27■□□□□ 0.84
ARFGAP3Q9NP61 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
ARFGAP3Q9NP61 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ARFGAP3Q9NP61 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ARFGAP3Q9NP61 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ARFGAP3Q9NP61 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ARFGAP3Q9NP61 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
ARFGAP3Q9NP61 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.26■□□□□ 0.83
ARFGAP3Q9NP61 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms