Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VCX3AQ9NNX9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 AC141586.3-201ENST00000562166 1838 ntBASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 SERBP1P1-201ENST00000396021 1160 ntBASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 LINC01126-201ENST00000623515 1646 ntBASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VCX3AQ9NNX9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VCX3AQ9NNX9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 AC239859.2-201ENST00000444165 318 ntBASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 AC133561.4-201ENST00000566112 224 ntBASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 AC080080.1-201ENST00000625121 2420 ntBASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VCX3AQ9NNX9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms