Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 BCRP1-201ENST00000444246 691 ntBASIC17.68■□□□□ 0.42
CHD8Q9HCK8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 DPP3P2-201ENST00000416030 1696 ntBASIC17.67■□□□□ 0.42
CHD8Q9HCK8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.67■□□□□ 0.42
CHD8Q9HCK8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 AC009533.2-201ENST00000543664 586 ntBASIC17.67■□□□□ 0.42
CHD8Q9HCK8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 AC008608.2-201ENST00000606089 416 ntBASIC17.67■□□□□ 0.42
CHD8Q9HCK8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD8Q9HCK8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 AC012640.2-201ENST00000561606 901 ntBASIC17.66■□□□□ 0.42
CHD8Q9HCK8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD8Q9HCK8 AL024507.2-201ENST00000606070 2574 ntBASIC17.65■□□□□ 0.42
CHD8Q9HCK8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 AC005034.1-201ENST00000426657 489 ntBASIC17.65■□□□□ 0.42
CHD8Q9HCK8 AC132008.2-207ENST00000454517 770 ntBASIC17.65■□□□□ 0.42
CHD8Q9HCK8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 SNHG9-202ENST00000564014 471 ntBASIC17.65■□□□□ 0.42
CHD8Q9HCK8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 RBM17P3-201ENST00000417687 1192 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms