Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 ATP5G2P1-201ENST00000433580 426 ntBASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.87■■□□□ 1.09
RPAP3Q9H6T3 LINC01521-201ENST00000504184 1943 ntBASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 SEC1P-202ENST00000473944 940 ntBASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP3Q9H6T3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 AL450487.1-201ENST00000426799 995 ntBASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
RPAP3Q9H6T3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 AC012313.10-201ENST00000623509 926 ntBASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
RPAP3Q9H6T3 TEX21P-204ENST00000641479 1693 ntBASIC21.83■■□□□ 1.09
RPAP3Q9H6T3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RPAP3Q9H6T3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RPAP3Q9H6T3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.83■■□□□ 1.09
RPAP3Q9H6T3 AC092119.3-201ENST00000612618 583 ntBASIC21.83■■□□□ 1.09
RPAP3Q9H6T3 NPAP1P7-201ENST00000613027 823 ntBASIC21.83■■□□□ 1.09
RPAP3Q9H6T3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.83■■□□□ 1.09
RPAP3Q9H6T3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RPAP3Q9H6T3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RPAP3Q9H6T3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.83■■□□□ 1.08
RPAP3Q9H6T3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RPAP3Q9H6T3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RPAP3Q9H6T3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RPAP3Q9H6T3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.83■■□□□ 1.08
RPAP3Q9H6T3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPAP3Q9H6T3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms