Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 AC018470.1-201ENST00000624790 3129 ntBASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 AC090192.1-201ENST00000517740 490 ntBASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 AC079598.2-202ENST00000546624 1451 ntBASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBB1Q9H4B7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 AC126763.1-201ENST00000552015 2118 ntBASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB1Q9H4B7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 AL355802.2-201ENST00000402069 882 ntBASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 AL133373.2-201ENST00000623187 2828 ntBASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB1Q9H4B7 AC005332.8-201ENST00000622750 2735 ntBASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms