Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 RNA5SP423-201ENST00000517127 109 ntBASIC5.8□□□□□ -1.48
HMCN1Q96RW7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 AC093520.2-201ENST00000561830 333 ntBASIC5.8□□□□□ -1.48
HMCN1Q96RW7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 AL031432.2-201ENST00000566714 459 ntBASIC5.8□□□□□ -1.48
HMCN1Q96RW7 AL928711.1-201ENST00000570165 459 ntBASIC5.8□□□□□ -1.48
HMCN1Q96RW7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMCN1Q96RW7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 TREX1-205ENST00000625293 1783 ntBASIC5.79□□□□□ -1.48
HMCN1Q96RW7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 AC108751.1-201ENST00000490852 363 ntBASIC5.79□□□□□ -1.48
HMCN1Q96RW7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 ELL2P1-201ENST00000413990 1906 ntBASIC5.79□□□□□ -1.48
HMCN1Q96RW7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 CYP51A1P2-201ENST00000419457 1499 ntBASIC5.79□□□□□ -1.48
HMCN1Q96RW7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 GPR53P-205ENST00000457298 1084 ntBASIC5.79□□□□□ -1.48
HMCN1Q96RW7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 MIR661-201ENST00000384842 89 ntBASIC5.79□□□□□ -1.48
HMCN1Q96RW7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMCN1Q96RW7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms