Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.09■□□□□ 0.17
SPG11Q96JI7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SPG11Q96JI7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SPG11Q96JI7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SPG11Q96JI7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.09■□□□□ 0.17
SPG11Q96JI7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 AC104417.2-201ENST00000562989 1793 ntBASIC16.09■□□□□ 0.17
SPG11Q96JI7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 AL391807.1-203ENST00000604392 2365 ntBASIC16.09■□□□□ 0.17
SPG11Q96JI7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SPG11Q96JI7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SPG11Q96JI7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SPG11Q96JI7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SPG11Q96JI7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SPG11Q96JI7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SPG11Q96JI7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SPG11Q96JI7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.08■□□□□ 0.17
SPG11Q96JI7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.08■□□□□ 0.17
SPG11Q96JI7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SPG11Q96JI7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SPG11Q96JI7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
SPG11Q96JI7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
SPG11Q96JI7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
SPG11Q96JI7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPG11Q96JI7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SPG11Q96JI7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SPG11Q96JI7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SPG11Q96JI7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPG11Q96JI7 AL031284.1-201ENST00000419297 478 ntBASIC16.08■□□□□ 0.16
SPG11Q96JI7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.08■□□□□ 0.16
SPG11Q96JI7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.08■□□□□ 0.16
SPG11Q96JI7 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.08■□□□□ 0.16
SPG11Q96JI7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SPG11Q96JI7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPG11Q96JI7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.08■□□□□ 0.16
SPG11Q96JI7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.08■□□□□ 0.16
SPG11Q96JI7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.08■□□□□ 0.16
SPG11Q96JI7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPG11Q96JI7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPG11Q96JI7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.08■□□□□ 0.16
SPG11Q96JI7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPG11Q96JI7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPG11Q96JI7 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.08■□□□□ 0.16
SPG11Q96JI7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.07■□□□□ 0.16
SPG11Q96JI7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.07■□□□□ 0.16
SPG11Q96JI7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SPG11Q96JI7 AL353801.3-201ENST00000609898 542 ntBASIC16.07■□□□□ 0.16
SPG11Q96JI7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.07■□□□□ 0.16
SPG11Q96JI7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.07■□□□□ 0.16
SPG11Q96JI7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 MIR1233-2-201ENST00000408138 82 ntBASIC16.07■□□□□ 0.16
SPG11Q96JI7 MIR1233-1-201ENST00000408722 82 ntBASIC16.07■□□□□ 0.16
SPG11Q96JI7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
SPG11Q96JI7 AC079776.4-201ENST00000511039 504 ntBASIC16.07■□□□□ 0.16
SPG11Q96JI7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SPG11Q96JI7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.07■□□□□ 0.16
SPG11Q96JI7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.07■□□□□ 0.16
SPG11Q96JI7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SPG11Q96JI7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPG11Q96JI7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 LINC00265-3P-201ENST00000447588 903 ntBASIC16.06■□□□□ 0.16
SPG11Q96JI7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 AC064862.7-201ENST00000604520 867 ntBASIC16.06■□□□□ 0.16
SPG11Q96JI7 AL121772.3-201ENST00000610840 674 ntBASIC16.06■□□□□ 0.16
SPG11Q96JI7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms