Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 AC008403.3-201ENST00000598924 454 ntBASIC19.2■□□□□ 0.66
LRRC39Q96DD0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 KRT8P41-201ENST00000533985 1514 ntBASIC19.2■□□□□ 0.66
LRRC39Q96DD0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC39Q96DD0 AC073592.3-201ENST00000625118 1834 ntBASIC19.18■□□□□ 0.66
LRRC39Q96DD0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 MTDHP1-201ENST00000605323 784 ntBASIC19.18■□□□□ 0.66
LRRC39Q96DD0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC39Q96DD0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 AL354751.1-201ENST00000412768 1863 ntBASIC19.17■□□□□ 0.66
LRRC39Q96DD0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC39Q96DD0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC39Q96DD0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC39Q96DD0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC39Q96DD0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms