Protein–RNA interactions for Protein: Q96BQ5

CCDC127, Coiled-coil domain-containing protein 127, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127Q96BQ5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 AC097488.1-201ENST00000507834 756 ntBASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC127Q96BQ5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 CKBP1-201ENST00000565489 1086 ntBASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 AP000525.1-201ENST00000608286 694 ntBASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 DGCR10-201ENST00000609839 495 ntBASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC127Q96BQ5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 AC098818.2-201ENST00000564925 2320 ntBASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 UNC93B2-201ENST00000285383 730 ntBASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 CRYGFP-201ENST00000418459 633 ntBASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 PRSS44-201ENST00000515154 1146 ntBASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 AC079598.2-202ENST00000546624 1451 ntBASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC127Q96BQ5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 MFAP1P1-201ENST00000442257 1255 ntBASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC127Q96BQ5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC127Q96BQ5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms