Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 AC092183.1-201ENST00000469884 875 ntBASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 AP001005.1-201ENST00000571755 1248 ntBASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM43Q96BQ3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 AP003733.1-201ENST00000491725 852 ntBASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 Z69720.1-201ENST00000601483 472 ntBASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 AC133561.1-201ENST00000568600 2415 ntBASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM43Q96BQ3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 AC020907.5-201ENST00000624372 1936 ntBASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM43Q96BQ3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 AC092865.5-201ENST00000545435 363 ntBASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 ZNF815P-204ENST00000434898 1737 ntBASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 SDHAP1-207ENST00000440850 2000 ntBASIC20.6■□□□□ 0.89
TRIM43Q96BQ3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM43Q96BQ3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms