Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF34Q969K3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF34Q969K3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF34Q969K3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF34Q969K3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF34Q969K3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF34Q969K3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RNF34Q969K3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF34Q969K3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RNF34Q969K3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF34Q969K3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
RNF34Q969K3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RNF34Q969K3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF34Q969K3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RNF34Q969K3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 KRT8P11-201ENST00000409686 1436 ntBASIC19.87■□□□□ 0.77
RNF34Q969K3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF34Q969K3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF34Q969K3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 AL390955.1-201ENST00000428694 934 ntBASIC19.87■□□□□ 0.77
RNF34Q969K3 TSPY23P-201ENST00000440136 739 ntBASIC19.87■□□□□ 0.77
RNF34Q969K3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF34Q969K3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF34Q969K3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF34Q969K3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF34Q969K3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF34Q969K3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RNF34Q969K3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF34Q969K3 AC090340.1-201ENST00000620778 4980 ntBASIC19.86■□□□□ 0.77
RNF34Q969K3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF34Q969K3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF34Q969K3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF34Q969K3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF34Q969K3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RNF34Q969K3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RNF34Q969K3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF34Q969K3 MFAP1P1-201ENST00000442257 1255 ntBASIC19.86■□□□□ 0.77
RNF34Q969K3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF34Q969K3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 PRSS44-201ENST00000515154 1146 ntBASIC19.86■□□□□ 0.77
RNF34Q969K3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF34Q969K3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF34Q969K3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.86■□□□□ 0.77
RNF34Q969K3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF34Q969K3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF34Q969K3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
RNF34Q969K3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF34Q969K3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF34Q969K3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF34Q969K3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF34Q969K3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF34Q969K3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF34Q969K3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF34Q969K3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF34Q969K3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF34Q969K3 MMP23A-201ENST00000234610 1017 ntBASIC19.85■□□□□ 0.77
RNF34Q969K3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF34Q969K3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF34Q969K3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF34Q969K3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF34Q969K3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.85■□□□□ 0.77
RNF34Q969K3 BX088651.1-201ENST00000540551 451 ntBASIC19.85■□□□□ 0.77
RNF34Q969K3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF34Q969K3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF34Q969K3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF34Q969K3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RNF34Q969K3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF34Q969K3 AC141586.3-201ENST00000562166 1838 ntBASIC19.85■□□□□ 0.77
RNF34Q969K3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF34Q969K3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF34Q969K3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF34Q969K3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms