Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 INGX-201ENST00000359239 846 ntBASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAM1L1Q8N609 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 ECEL1P3-201ENST00000427961 737 ntBASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 ECEL1P2-202ENST00000465689 757 ntBASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 AP003041.3-201ENST00000527151 707 ntBASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAM1L1Q8N609 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
TRAM1L1Q8N609 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAM1L1Q8N609 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 FAM87A-204ENST00000613235 858 ntBASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 AC008622.2-201ENST00000617006 1229 ntBASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAM1L1Q8N609 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 HMGA1P5-201ENST00000412453 271 ntBASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TRAM1L1Q8N609 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms