Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.89■□□□□ 0.3
LRRC28Q86X40 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LRRC28Q86X40 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LRRC28Q86X40 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LRRC28Q86X40 KRT18P29-201ENST00000397031 1267 ntBASIC16.89■□□□□ 0.29
LRRC28Q86X40 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LRRC28Q86X40 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC28Q86X40 AC005829.2-201ENST00000571422 1056 ntBASIC16.89■□□□□ 0.29
LRRC28Q86X40 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
LRRC28Q86X40 AC008403.3-201ENST00000598924 454 ntBASIC16.89■□□□□ 0.29
LRRC28Q86X40 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC28Q86X40 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC28Q86X40 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC28Q86X40 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
LRRC28Q86X40 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
LRRC28Q86X40 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
LRRC28Q86X40 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC28Q86X40 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC28Q86X40 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 KRT8P20-201ENST00000423953 1409 ntBASIC16.88■□□□□ 0.29
LRRC28Q86X40 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 AL390719.1-204ENST00000412397 1219 ntBASIC16.88■□□□□ 0.29
LRRC28Q86X40 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms