Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 AL161938.1-201ENST00000569833 2180 ntBASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 PRKY-204ENST00000533551 1019 ntBASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 AC092666.2-201ENST00000613287 246 ntBASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MRPL55Q7Z7F7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 KRT18P16-201ENST00000510337 1294 ntBASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 AC098934.4-201ENST00000564127 592 ntBASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 AC093503.3-201ENST00000624917 2352 ntBASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 AC104417.2-201ENST00000562989 1793 ntBASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms