Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 LINC01006-201ENST00000333319 2292 ntBASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC149Q6ZUS6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 PRELID1P1-202ENST00000567272 903 ntBASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 AC092119.3-201ENST00000612618 583 ntBASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 GPAT2P1-201ENST00000444924 1672 ntBASIC19.94■□□□□ 0.78
CCDC149Q6ZUS6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 AL645929.1-201ENST00000420084 975 ntBASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 MIR3652-201ENST00000579335 131 ntBASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 NPAP1P7-201ENST00000613027 823 ntBASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC149Q6ZUS6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 SPDYE13P-201ENST00000445314 798 ntBASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC149Q6ZUS6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms