Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 AC145285.6-201ENST00000604632 637 ntBASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 KRT8P11-201ENST00000409686 1436 ntBASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 INGX-201ENST00000359239 846 ntBASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 C2orf69P3-201ENST00000565542 1120 ntBASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 Z82202.1-201ENST00000623446 1880 ntBASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD3Q6PCD5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFWD3Q6PCD5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 KRT18P21-201ENST00000515767 1272 ntBASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
RFWD3Q6PCD5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFWD3Q6PCD5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
RFWD3Q6PCD5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFWD3Q6PCD5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms