Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.58■□□□□ 0.72
PTCRAQ6ISU1 AC009065.1-201ENST00000564055 1225 ntBASIC19.58■□□□□ 0.72
PTCRAQ6ISU1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.58■□□□□ 0.72
PTCRAQ6ISU1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCRAQ6ISU1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.58■□□□□ 0.72
PTCRAQ6ISU1 AC148477.8-201ENST00000624298 468 ntBASIC19.58■□□□□ 0.72
PTCRAQ6ISU1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCRAQ6ISU1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.58■□□□□ 0.72
PTCRAQ6ISU1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCRAQ6ISU1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTCRAQ6ISU1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PTCRAQ6ISU1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 MIR564-202ENST00000385049 94 ntBASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 VENTXP7-201ENST00000475503 772 ntBASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 ZNF259P1-201ENST00000407656 1365 ntBASIC19.57■□□□□ 0.72
PTCRAQ6ISU1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 AL592071.1-201ENST00000611956 408 ntBASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 AC124864.1-201ENST00000623408 392 ntBASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCRAQ6ISU1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 AF106564.1-201ENST00000607058 2553 ntBASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 PMS2P2-201ENST00000425039 1128 ntBASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PTCRAQ6ISU1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 GUSBP12-201ENST00000513727 720 ntBASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms