Protein–RNA interactions for Protein: Q5VZK9

CARMIL1, F-actin-uncapping protein LRRC16A, humanhuman

Predictions only

Length 1,371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1Q5VZK9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CARMIL1Q5VZK9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CARMIL1Q5VZK9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC30.82■■■□□ 2.52
CARMIL1Q5VZK9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC30.82■■■□□ 2.52
CARMIL1Q5VZK9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC30.82■■■□□ 2.52
CARMIL1Q5VZK9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.52
CARMIL1Q5VZK9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CARMIL1Q5VZK9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CARMIL1Q5VZK9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
CARMIL1Q5VZK9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 AC009078.2-202ENST00000463353 338 ntBASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 AL031008.1-201ENST00000619963 541 ntBASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 HOXB1-202ENST00000577092 1414 ntBASIC30.81■■■□□ 2.52
CARMIL1Q5VZK9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 EMBP1-201ENST00000458200 901 ntBASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 TEX21P-204ENST00000641479 1693 ntBASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
CARMIL1Q5VZK9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 AC104390.1-201ENST00000555663 520 ntBASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
CARMIL1Q5VZK9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC30.78■■■□□ 2.52
CARMIL1Q5VZK9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CARMIL1Q5VZK9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CARMIL1Q5VZK9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC30.78■■■□□ 2.52
CARMIL1Q5VZK9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC30.78■■■□□ 2.52
CARMIL1Q5VZK9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC30.78■■■□□ 2.52
CARMIL1Q5VZK9 AC010240.3-201ENST00000607688 395 ntBASIC30.78■■■□□ 2.52
CARMIL1Q5VZK9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC30.78■■■□□ 2.52
CARMIL1Q5VZK9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 RCC2P3-201ENST00000418112 1537 ntBASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 AC079781.3-201ENST00000449110 356 ntBASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC30.77■■■□□ 2.52
CARMIL1Q5VZK9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
CARMIL1Q5VZK9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CARMIL1Q5VZK9 AC008556.1-201ENST00000610908 2040 ntBASIC30.76■■■□□ 2.52
CARMIL1Q5VZK9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 LINC00265-3P-201ENST00000447588 903 ntBASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 TOB2P1-201ENST00000469761 992 ntBASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 AC012615.1-201ENST00000565797 1299 ntBASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 AL512353.2-201ENST00000448759 1962 ntBASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 KRT8P7-201ENST00000533003 1432 ntBASIC30.76■■■□□ 2.51
CARMIL1Q5VZK9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CARMIL1Q5VZK9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC30.75■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms