Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK3Q00526 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK3Q00526 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK3Q00526 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK3Q00526 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK3Q00526 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK3Q00526 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.7■□□□□ 0.58
CDK3Q00526 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.7■□□□□ 0.58
CDK3Q00526 GPAT2P1-201ENST00000444924 1672 ntBASIC18.69■□□□□ 0.58
CDK3Q00526 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK3Q00526 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK3Q00526 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.69■□□□□ 0.58
CDK3Q00526 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDK3Q00526 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CDK3Q00526 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK3Q00526 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK3Q00526 AC117947.1-201ENST00000427448 529 ntBASIC18.69■□□□□ 0.58
CDK3Q00526 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDK3Q00526 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK3Q00526 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.69■□□□□ 0.58
CDK3Q00526 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.69■□□□□ 0.58
CDK3Q00526 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDK3Q00526 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK3Q00526 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 FP475955.4-201ENST00000623131 1990 ntBASIC18.68■□□□□ 0.58
CDK3Q00526 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.68■□□□□ 0.58
CDK3Q00526 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK3Q00526 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 AC139887.4-201ENST00000607877 719 ntBASIC18.68■□□□□ 0.58
CDK3Q00526 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDK3Q00526 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDK3Q00526 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CDK3Q00526 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.68■□□□□ 0.58
CDK3Q00526 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK3Q00526 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK3Q00526 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK3Q00526 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.67■□□□□ 0.58
CDK3Q00526 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.67■□□□□ 0.58
CDK3Q00526 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK3Q00526 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDK3Q00526 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 AL023284.2-201ENST00000405850 579 ntBASIC18.67■□□□□ 0.58
CDK3Q00526 AK4P3-201ENST00000418260 669 ntBASIC18.67■□□□□ 0.58
CDK3Q00526 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 COX11P1-201ENST00000489116 835 ntBASIC18.67■□□□□ 0.58
CDK3Q00526 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK3Q00526 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.67■□□□□ 0.58
CDK3Q00526 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK3Q00526 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.67■□□□□ 0.58
CDK3Q00526 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK3Q00526 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CDK3Q00526 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDK3Q00526 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK3Q00526 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDK3Q00526 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms