Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNA1P78396 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNA1P78396 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
CCNA1P78396 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.61■■□□□ 1.05
CCNA1P78396 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNA1P78396 HLA-F-220ENST00000434407 884 ntBASIC21.61■■□□□ 1.05
CCNA1P78396 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.61■■□□□ 1.05
CCNA1P78396 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.61■■□□□ 1.05
CCNA1P78396 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.61■■□□□ 1.05
CCNA1P78396 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.61■■□□□ 1.05
CCNA1P78396 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNA1P78396 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNA1P78396 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNA1P78396 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNA1P78396 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCNA1P78396 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.6■■□□□ 1.05
CCNA1P78396 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCNA1P78396 CHCHD2P8-201ENST00000429873 447 ntBASIC21.6■■□□□ 1.05
CCNA1P78396 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.6■■□□□ 1.05
CCNA1P78396 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.6■■□□□ 1.05
CCNA1P78396 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CCNA1P78396 MIR3917-201ENST00000580971 93 ntBASIC21.6■■□□□ 1.05
CCNA1P78396 AP002414.4-201ENST00000589764 1148 ntBASIC21.6■■□□□ 1.05
CCNA1P78396 AL136038.4-201ENST00000603606 1261 ntBASIC21.6■■□□□ 1.05
CCNA1P78396 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.6■■□□□ 1.05
CCNA1P78396 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.6■■□□□ 1.05
CCNA1P78396 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 CLDN5-201ENST00000403084 2357 ntBASIC21.6■■□□□ 1.05
CCNA1P78396 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNA1P78396 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNA1P78396 AL137060.1-201ENST00000618151 2648 ntBASIC21.59■■□□□ 1.05
CCNA1P78396 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNA1P78396 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNA1P78396 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCNA1P78396 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNA1P78396 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNA1P78396 TCF3P1-201ENST00000423021 1937 ntBASIC21.59■■□□□ 1.05
CCNA1P78396 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNA1P78396 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNA1P78396 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNA1P78396 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNA1P78396 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNA1P78396 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNA1P78396 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCNA1P78396 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.59■■□□□ 1.05
CCNA1P78396 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNA1P78396 AP002383.4-201ENST00000442518 975 ntBASIC21.59■■□□□ 1.05
CCNA1P78396 FAAHP1-202ENST00000446499 1238 ntBASIC21.59■■□□□ 1.05
CCNA1P78396 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCNA1P78396 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.59■■□□□ 1.05
CCNA1P78396 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.59■■□□□ 1.05
CCNA1P78396 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.59■■□□□ 1.05
CCNA1P78396 AC079602.3-201ENST00000623931 403 ntBASIC21.59■■□□□ 1.05
CCNA1P78396 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.59■■□□□ 1.05
CCNA1P78396 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.59■■□□□ 1.05
CCNA1P78396 AL157888.1-201ENST00000631930 593 ntBASIC21.59■■□□□ 1.05
CCNA1P78396 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNA1P78396 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNA1P78396 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.59■■□□□ 1.05
CCNA1P78396 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CCNA1P78396 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNA1P78396 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNA1P78396 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNA1P78396 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNA1P78396 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CCNA1P78396 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CCNA1P78396 MIR662-201ENST00000384847 95 ntBASIC21.58■■□□□ 1.05
CCNA1P78396 NUS1P1-201ENST00000446295 882 ntBASIC21.58■■□□□ 1.05
CCNA1P78396 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNA1P78396 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNA1P78396 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CCNA1P78396 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.58■■□□□ 1.05
CCNA1P78396 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNA1P78396 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNA1P78396 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CCNA1P78396 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNA1P78396 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
CCNA1P78396 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNA1P78396 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNA1P78396 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNA1P78396 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.57■■□□□ 1.04
CCNA1P78396 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CCNA1P78396 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNA1P78396 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCNA1P78396 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.57■■□□□ 1.04
CCNA1P78396 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNA1P78396 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms