Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC25A1P53007 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC25A1P53007 AP003097.1-201ENST00000530657 1135 ntBASIC16.9■□□□□ 0.3
SLC25A1P53007 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC25A1P53007 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC25A1P53007 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SLC25A1P53007 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC25A1P53007 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC25A1P53007 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC25A1P53007 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC25A1P53007 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.89■□□□□ 0.3
SLC25A1P53007 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 AL390961.4-201ENST00000623958 2535 ntBASIC16.89■□□□□ 0.29
SLC25A1P53007 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC25A1P53007 KRT17P3-201ENST00000420566 1262 ntBASIC16.89■□□□□ 0.29
SLC25A1P53007 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC25A1P53007 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC25A1P53007 AC069544.1-201ENST00000609399 999 ntBASIC16.89■□□□□ 0.29
SLC25A1P53007 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
SLC25A1P53007 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC25A1P53007 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC25A1P53007 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC25A1P53007 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC25A1P53007 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC25A1P53007 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC25A1P53007 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC25A1P53007 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC25A1P53007 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC25A1P53007 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC25A1P53007 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SLC25A1P53007 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC25A1P53007 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC25A1P53007 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC25A1P53007 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC25A1P53007 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
SLC25A1P53007 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC25A1P53007 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC25A1P53007 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC25A1P53007 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC25A1P53007 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC25A1P53007 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC25A1P53007 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC25A1P53007 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC25A1P53007 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC25A1P53007 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 Z85996.1-201ENST00000494644 937 ntBASIC16.87■□□□□ 0.29
SLC25A1P53007 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC25A1P53007 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC25A1P53007 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC25A1P53007 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SLC25A1P53007 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC25A1P53007 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC25A1P53007 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms