Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HCFC1P51610 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.57■□□□□ 0.24
HCFC1P51610 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.57■□□□□ 0.24
HCFC1P51610 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HCFC1P51610 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
HCFC1P51610 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC1P51610 BX276092.5-203ENST00000456199 560 ntBASIC16.57■□□□□ 0.24
HCFC1P51610 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 PRELID1P1-202ENST00000567272 903 ntBASIC16.57■□□□□ 0.24
HCFC1P51610 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.57■□□□□ 0.24
HCFC1P51610 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC1P51610 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.57■□□□□ 0.24
HCFC1P51610 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
HCFC1P51610 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC1P51610 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HCFC1P51610 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.56■□□□□ 0.24
HCFC1P51610 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 AC016734.2-201ENST00000624325 1377 ntBASIC16.56■□□□□ 0.24
HCFC1P51610 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC1P51610 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HCFC1P51610 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.56■□□□□ 0.24
HCFC1P51610 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC1P51610 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HCFC1P51610 AL732292.2-201ENST00000609649 430 ntBASIC16.56■□□□□ 0.24
HCFC1P51610 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HCFC1P51610 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC1P51610 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 ZNF815P-204ENST00000434898 1737 ntBASIC16.55■□□□□ 0.24
HCFC1P51610 AL162377.1-201ENST00000618844 1793 ntBASIC16.55■□□□□ 0.24
HCFC1P51610 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HCFC1P51610 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC1P51610 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.55■□□□□ 0.24
HCFC1P51610 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.55■□□□□ 0.24
HCFC1P51610 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.55■□□□□ 0.24
HCFC1P51610 AC092329.2-201ENST00000598402 547 ntBASIC16.55■□□□□ 0.24
HCFC1P51610 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.55■□□□□ 0.24
HCFC1P51610 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 GPAT2P1-201ENST00000444924 1672 ntBASIC16.55■□□□□ 0.24
HCFC1P51610 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HCFC1P51610 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.55■□□□□ 0.24
HCFC1P51610 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.55■□□□□ 0.24
HCFC1P51610 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC1P51610 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.55■□□□□ 0.24
HCFC1P51610 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.55■□□□□ 0.24
HCFC1P51610 TPSP2-201ENST00000561760 610 ntBASIC16.55■□□□□ 0.24
HCFC1P51610 MIR4674-201ENST00000582457 87 ntBASIC16.55■□□□□ 0.24
HCFC1P51610 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC1P51610 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC1P51610 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HCFC1P51610 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HCFC1P51610 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC1P51610 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC1P51610 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 AP002383.4-201ENST00000442518 975 ntBASIC16.54■□□□□ 0.24
HCFC1P51610 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HCFC1P51610 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC1P51610 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC1P51610 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
HCFC1P51610 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC1P51610 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HCFC1P51610 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms