Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC233702.5-201ENST00000584107 538 ntBASIC16.92■□□□□ 0.3
CSNK1A1P48729 AC011298.2-201ENST00000617989 482 ntBASIC16.92■□□□□ 0.3
CSNK1A1P48729 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1A1P48729 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1A1P48729 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1A1P48729 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1A1P48729 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1A1P48729 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1A1P48729 MIR718-201ENST00000390190 70 ntBASIC16.91■□□□□ 0.3
CSNK1A1P48729 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1A1P48729 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 MIR6786-201ENST00000616843 113 ntBASIC16.91■□□□□ 0.3
CSNK1A1P48729 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1A1P48729 AL049812.1-201ENST00000432563 2267 ntBASIC16.91■□□□□ 0.3
CSNK1A1P48729 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1A1P48729 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.91■□□□□ 0.3
CSNK1A1P48729 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.91■□□□□ 0.3
CSNK1A1P48729 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.91■□□□□ 0.3
CSNK1A1P48729 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSNK1A1P48729 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 AC091390.4-202ENST00000476426 537 ntBASIC16.9■□□□□ 0.3
CSNK1A1P48729 AC008550.1-201ENST00000511500 884 ntBASIC16.9■□□□□ 0.3
CSNK1A1P48729 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 AL049637.2-201ENST00000641778 930 ntBASIC16.9■□□□□ 0.3
CSNK1A1P48729 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.9■□□□□ 0.3
CSNK1A1P48729 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSNK1A1P48729 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CSNK1A1P48729 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CSNK1A1P48729 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CSNK1A1P48729 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 FSCN1P1-201ENST00000568912 1481 ntBASIC16.89■□□□□ 0.29
CSNK1A1P48729 AL020996.1-203ENST00000536896 2307 ntBASIC16.89■□□□□ 0.29
CSNK1A1P48729 AC098818.2-201ENST00000564925 2320 ntBASIC16.89■□□□□ 0.29
CSNK1A1P48729 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CSNK1A1P48729 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 FAM207BP-201ENST00000447172 505 ntBASIC16.89■□□□□ 0.29
CSNK1A1P48729 B3GAT3P1-201ENST00000471720 806 ntBASIC16.89■□□□□ 0.29
CSNK1A1P48729 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 PRSS44-201ENST00000515154 1146 ntBASIC16.89■□□□□ 0.29
CSNK1A1P48729 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.89■□□□□ 0.29
CSNK1A1P48729 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.89■□□□□ 0.29
CSNK1A1P48729 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.89■□□□□ 0.29
CSNK1A1P48729 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms