Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.86■□□□□ 0.77
MTHFRP42898 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.86■□□□□ 0.77
MTHFRP42898 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.86■□□□□ 0.77
MTHFRP42898 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
MTHFRP42898 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.86■□□□□ 0.77
MTHFRP42898 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 AC009237.14-201ENST00000609975 1594 ntBASIC19.86■□□□□ 0.77
MTHFRP42898 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.86■□□□□ 0.77
MTHFRP42898 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
MTHFRP42898 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFRP42898 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFRP42898 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
MTHFRP42898 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MTHFRP42898 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MTHFRP42898 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFRP42898 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFRP42898 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFRP42898 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
MTHFRP42898 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.85■□□□□ 0.77
MTHFRP42898 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFRP42898 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MTHFRP42898 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFRP42898 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.85■□□□□ 0.77
MTHFRP42898 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.85■□□□□ 0.77
MTHFRP42898 NUS1P1-201ENST00000446295 882 ntBASIC19.85■□□□□ 0.77
MTHFRP42898 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MTHFRP42898 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.85■□□□□ 0.77
MTHFRP42898 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.85■□□□□ 0.77
MTHFRP42898 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MTHFRP42898 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MTHFRP42898 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.85■□□□□ 0.77
MTHFRP42898 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFRP42898 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.85■□□□□ 0.77
MTHFRP42898 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFRP42898 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFRP42898 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.85■□□□□ 0.77
MTHFRP42898 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MTHFRP42898 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFRP42898 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFRP42898 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.84■□□□□ 0.77
MTHFRP42898 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFRP42898 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFRP42898 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
MTHFRP42898 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
MTHFRP42898 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.84■□□□□ 0.77
MTHFRP42898 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.84■□□□□ 0.77
MTHFRP42898 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.84■□□□□ 0.77
MTHFRP42898 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.84■□□□□ 0.77
MTHFRP42898 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.84■□□□□ 0.77
MTHFRP42898 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.84■□□□□ 0.77
MTHFRP42898 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.84■□□□□ 0.77
MTHFRP42898 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFRP42898 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.84■□□□□ 0.77
MTHFRP42898 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.84■□□□□ 0.77
MTHFRP42898 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFRP42898 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFRP42898 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFRP42898 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFRP42898 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFRP42898 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFRP42898 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.84■□□□□ 0.77
MTHFRP42898 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
MTHFRP42898 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
MTHFRP42898 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.83■□□□□ 0.77
MTHFRP42898 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
MTHFRP42898 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MTHFRP42898 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MTHFRP42898 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MTHFRP42898 AP002383.4-201ENST00000442518 975 ntBASIC19.83■□□□□ 0.77
MTHFRP42898 UNC93B7-201ENST00000509439 705 ntBASIC19.83■□□□□ 0.77
MTHFRP42898 KRT8P26-201ENST00000534154 1276 ntBASIC19.83■□□□□ 0.77
MTHFRP42898 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
MTHFRP42898 AC024243.1-201ENST00000609234 778 ntBASIC19.83■□□□□ 0.77
MTHFRP42898 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MTHFRP42898 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
MTHFRP42898 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
MTHFRP42898 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
MTHFRP42898 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
MTHFRP42898 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.83■□□□□ 0.76
MTHFRP42898 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.83■□□□□ 0.76
MTHFRP42898 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MTHFRP42898 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
MTHFRP42898 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
MTHFRP42898 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MTHFRP42898 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.83■□□□□ 0.76
MTHFRP42898 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MTHFRP42898 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MTHFRP42898 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MTHFRP42898 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MTHFRP42898 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.82■□□□□ 0.76
MTHFRP42898 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
MTHFRP42898 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MTHFRP42898 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
MTHFRP42898 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms