Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SDHAP1-207ENST00000440850 2000 ntBASIC24.11■■□□□ 1.45
COL15A1P39059 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL15A1P39059 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.11■■□□□ 1.45
COL15A1P39059 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL15A1P39059 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL15A1P39059 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
COL15A1P39059 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC24.11■■□□□ 1.45
COL15A1P39059 TSSC2-201ENST00000450217 709 ntBASIC24.11■■□□□ 1.45
COL15A1P39059 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC24.11■■□□□ 1.45
COL15A1P39059 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC24.11■■□□□ 1.45
COL15A1P39059 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.11■■□□□ 1.45
COL15A1P39059 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
COL15A1P39059 AC092329.2-201ENST00000598402 547 ntBASIC24.11■■□□□ 1.45
COL15A1P39059 WDR6-223ENST00000627177 207 ntTSL 2 BASIC24.11■■□□□ 1.45
COL15A1P39059 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL15A1P39059 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL15A1P39059 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC24.11■■□□□ 1.45
COL15A1P39059 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL15A1P39059 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC24.11■■□□□ 1.45
COL15A1P39059 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC24.1■■□□□ 1.45
COL15A1P39059 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC24.1■■□□□ 1.45
COL15A1P39059 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.1■■□□□ 1.45
COL15A1P39059 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.1■■□□□ 1.45
COL15A1P39059 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL15A1P39059 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL15A1P39059 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL15A1P39059 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL15A1P39059 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC24.1■■□□□ 1.45
COL15A1P39059 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC24.1■■□□□ 1.45
COL15A1P39059 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC24.1■■□□□ 1.45
COL15A1P39059 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC24.1■■□□□ 1.45
COL15A1P39059 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL15A1P39059 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC24.1■■□□□ 1.45
COL15A1P39059 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC24.1■■□□□ 1.45
COL15A1P39059 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL15A1P39059 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL15A1P39059 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL15A1P39059 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL15A1P39059 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC24.09■■□□□ 1.45
COL15A1P39059 AC016734.2-201ENST00000624325 1377 ntBASIC24.09■■□□□ 1.45
COL15A1P39059 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.09■■□□□ 1.45
COL15A1P39059 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL15A1P39059 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.09■■□□□ 1.45
COL15A1P39059 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL15A1P39059 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC24.09■■□□□ 1.45
COL15A1P39059 AL023284.2-201ENST00000405850 579 ntBASIC24.09■■□□□ 1.45
COL15A1P39059 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC24.09■■□□□ 1.45
COL15A1P39059 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
COL15A1P39059 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL15A1P39059 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL15A1P39059 AC011498.5-201ENST00000592027 486 ntBASIC24.09■■□□□ 1.45
COL15A1P39059 AL121672.3-201ENST00000608644 468 ntBASIC24.09■■□□□ 1.45
COL15A1P39059 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.09■■□□□ 1.45
COL15A1P39059 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL15A1P39059 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL15A1P39059 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL15A1P39059 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL15A1P39059 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL15A1P39059 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL15A1P39059 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC24.08■■□□□ 1.45
COL15A1P39059 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL15A1P39059 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC24.08■■□□□ 1.45
COL15A1P39059 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
COL15A1P39059 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL15A1P39059 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL15A1P39059 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL15A1P39059 AP002383.4-201ENST00000442518 975 ntBASIC24.08■■□□□ 1.45
COL15A1P39059 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL15A1P39059 SEC1P-202ENST00000473944 940 ntBASIC24.08■■□□□ 1.45
COL15A1P39059 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC24.08■■□□□ 1.45
COL15A1P39059 RN7SL510P-201ENST00000581311 263 ntBASIC24.08■■□□□ 1.45
COL15A1P39059 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL15A1P39059 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL15A1P39059 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC24.08■■□□□ 1.45
COL15A1P39059 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
COL15A1P39059 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.44
COL15A1P39059 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.44
COL15A1P39059 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
COL15A1P39059 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.08■■□□□ 1.44
COL15A1P39059 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.07■■□□□ 1.44
COL15A1P39059 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC24.07■■□□□ 1.44
COL15A1P39059 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL15A1P39059 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL15A1P39059 GOLGA6L5P-202ENST00000515341 1828 ntBASIC24.07■■□□□ 1.44
COL15A1P39059 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL15A1P39059 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL15A1P39059 BX276092.5-203ENST00000456199 560 ntBASIC24.07■■□□□ 1.44
COL15A1P39059 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC24.07■■□□□ 1.44
COL15A1P39059 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC24.07■■□□□ 1.44
COL15A1P39059 AC111152.3-201ENST00000569699 673 ntBASIC24.07■■□□□ 1.44
COL15A1P39059 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC24.07■■□□□ 1.44
COL15A1P39059 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL15A1P39059 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
COL15A1P39059 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL15A1P39059 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL15A1P39059 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL15A1P39059 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL15A1P39059 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.07■■□□□ 1.44
COL15A1P39059 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL15A1P39059 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms