Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT20P35900 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT20P35900 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
KRT20P35900 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT20P35900 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT20P35900 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT20P35900 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT20P35900 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT20P35900 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT20P35900 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
KRT20P35900 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT20P35900 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT20P35900 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT20P35900 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
KRT20P35900 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
KRT20P35900 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT20P35900 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KRT20P35900 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT20P35900 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT20P35900 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT20P35900 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT20P35900 RPPH1-201ENST00000516869 333 ntBASIC18.05■□□□□ 0.48
KRT20P35900 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT20P35900 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT20P35900 AC124016.1-201ENST00000609552 612 ntBASIC18.05■□□□□ 0.48
KRT20P35900 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT20P35900 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT20P35900 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT20P35900 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT20P35900 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT20P35900 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.05■□□□□ 0.48
KRT20P35900 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
KRT20P35900 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
KRT20P35900 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT20P35900 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT20P35900 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
KRT20P35900 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT20P35900 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.04■□□□□ 0.48
KRT20P35900 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
KRT20P35900 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.04■□□□□ 0.48
KRT20P35900 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT20P35900 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 AC133681.1-201ENST00000465482 601 ntBASIC18.04■□□□□ 0.48
KRT20P35900 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT20P35900 KRT18P16-201ENST00000510337 1294 ntBASIC18.04■□□□□ 0.48
KRT20P35900 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.04■□□□□ 0.48
KRT20P35900 AC142381.4-202ENST00000563973 229 ntBASIC18.04■□□□□ 0.48
KRT20P35900 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.04■□□□□ 0.48
KRT20P35900 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KRT20P35900 TMEM191A-211ENST00000637163 1067 ntBASIC18.04■□□□□ 0.48
KRT20P35900 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
KRT20P35900 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT20P35900 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT20P35900 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT20P35900 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT20P35900 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
KRT20P35900 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KRT20P35900 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.03■□□□□ 0.48
KRT20P35900 AL158047.1-201ENST00000445918 881 ntBASIC18.03■□□□□ 0.48
KRT20P35900 KRT16P5-201ENST00000455284 522 ntBASIC18.03■□□□□ 0.48
KRT20P35900 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KRT20P35900 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT20P35900 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.03■□□□□ 0.48
KRT20P35900 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KRT20P35900 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT20P35900 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.03■□□□□ 0.48
KRT20P35900 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT20P35900 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
KRT20P35900 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KRT20P35900 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT20P35900 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT20P35900 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms