Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN1P35523 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN1P35523 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.61■■□□□ 1.05
CLCN1P35523 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN1P35523 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 AC008894.3-201ENST00000624324 3103 ntBASIC21.6■■□□□ 1.05
CLCN1P35523 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CLCN1P35523 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.6■■□□□ 1.05
CLCN1P35523 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.6■■□□□ 1.05
CLCN1P35523 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CLCN1P35523 AC093787.1-201ENST00000450396 207 ntBASIC21.6■■□□□ 1.05
CLCN1P35523 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.6■■□□□ 1.05
CLCN1P35523 AC005181.1-201ENST00000604782 1256 ntBASIC21.6■■□□□ 1.05
CLCN1P35523 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CLCN1P35523 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.6■■□□□ 1.05
CLCN1P35523 AC010980.2-201ENST00000587099 1412 ntBASIC21.6■■□□□ 1.05
CLCN1P35523 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CLCN1P35523 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN1P35523 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CLCN1P35523 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CLCN1P35523 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CLCN1P35523 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 KRT18P68-201ENST00000392293 1000 ntBASIC21.59■■□□□ 1.05
CLCN1P35523 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCN1P35523 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCN1P35523 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCN1P35523 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCN1P35523 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.59■■□□□ 1.05
CLCN1P35523 CYP2T3P-201ENST00000601990 817 ntBASIC21.59■■□□□ 1.05
CLCN1P35523 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN1P35523 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
CLCN1P35523 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN1P35523 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN1P35523 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN1P35523 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN1P35523 AC012317.2-201ENST00000623305 2251 ntBASIC21.58■■□□□ 1.05
CLCN1P35523 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.58■■□□□ 1.05
CLCN1P35523 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN1P35523 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.58■■□□□ 1.05
CLCN1P35523 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CLCN1P35523 AL512625.2-201ENST00000417533 625 ntBASIC21.58■■□□□ 1.05
CLCN1P35523 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN1P35523 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CLCN1P35523 AL050303.2-201ENST00000619798 666 ntBASIC21.58■■□□□ 1.05
CLCN1P35523 AC008694.1-202ENST00000636953 945 ntBASIC21.58■■□□□ 1.05
CLCN1P35523 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN1P35523 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC21.58■■□□□ 1.05
CLCN1P35523 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN1P35523 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN1P35523 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CLCN1P35523 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CLCN1P35523 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLCN1P35523 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLCN1P35523 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CLCN1P35523 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLCN1P35523 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.58■■□□□ 1.04
CLCN1P35523 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.58■■□□□ 1.04
CLCN1P35523 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CLCN1P35523 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CLCN1P35523 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.57■■□□□ 1.04
CLCN1P35523 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CLCN1P35523 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.57■■□□□ 1.04
CLCN1P35523 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.57■■□□□ 1.04
CLCN1P35523 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.57■■□□□ 1.04
CLCN1P35523 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 AL512353.2-201ENST00000448759 1962 ntBASIC21.57■■□□□ 1.04
CLCN1P35523 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.57■■□□□ 1.04
CLCN1P35523 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CLCN1P35523 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms