Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 UNC93B2-201ENST00000285383 730 ntBASIC20.4■□□□□ 0.86
CD58P19256 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.4■□□□□ 0.86
CD58P19256 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CD58P19256 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.4■□□□□ 0.86
CD58P19256 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.4■□□□□ 0.86
CD58P19256 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.4■□□□□ 0.86
CD58P19256 AC097488.1-201ENST00000507834 756 ntBASIC20.4■□□□□ 0.86
CD58P19256 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.4■□□□□ 0.86
CD58P19256 AC079598.2-202ENST00000546624 1451 ntBASIC20.4■□□□□ 0.86
CD58P19256 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.4■□□□□ 0.86
CD58P19256 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD58P19256 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.4■□□□□ 0.86
CD58P19256 BX323043.1-201ENST00000641006 1765 ntBASIC20.4■□□□□ 0.86
CD58P19256 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD58P19256 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD58P19256 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CD58P19256 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CD58P19256 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD58P19256 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CD58P19256 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.39■□□□□ 0.86
CD58P19256 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.39■□□□□ 0.86
CD58P19256 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.39■□□□□ 0.85
CD58P19256 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD58P19256 RNF165-205ENST00000588679 2904 ntBASIC20.39■□□□□ 0.85
CD58P19256 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.39■□□□□ 0.85
CD58P19256 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD58P19256 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CD58P19256 CRYGFP-201ENST00000418459 633 ntBASIC20.39■□□□□ 0.85
CD58P19256 AL390955.1-201ENST00000428694 934 ntBASIC20.39■□□□□ 0.85
CD58P19256 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.39■□□□□ 0.85
CD58P19256 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CD58P19256 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.39■□□□□ 0.85
CD58P19256 DGCR10-201ENST00000609839 495 ntBASIC20.39■□□□□ 0.85
CD58P19256 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.39■□□□□ 0.85
CD58P19256 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.39■□□□□ 0.85
CD58P19256 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD58P19256 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD58P19256 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
CD58P19256 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD58P19256 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD58P19256 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.39■□□□□ 0.85
CD58P19256 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD58P19256 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CD58P19256 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD58P19256 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.39■□□□□ 0.85
CD58P19256 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.39■□□□□ 0.85
CD58P19256 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.39■□□□□ 0.85
CD58P19256 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CD58P19256 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CD58P19256 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.38■□□□□ 0.85
CD58P19256 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.38■□□□□ 0.85
CD58P19256 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CD58P19256 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CD58P19256 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.38■□□□□ 0.85
CD58P19256 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.38■□□□□ 0.85
CD58P19256 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.38■□□□□ 0.85
CD58P19256 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
CD58P19256 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
CD58P19256 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.38■□□□□ 0.85
CD58P19256 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CD58P19256 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD58P19256 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.37■□□□□ 0.85
CD58P19256 FP475955.4-201ENST00000623131 1990 ntBASIC20.37■□□□□ 0.85
CD58P19256 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.37■□□□□ 0.85
CD58P19256 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.37■□□□□ 0.85
CD58P19256 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CD58P19256 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD58P19256 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms