Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
COX6A1P12074 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COX6A1P12074 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COX6A1P12074 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COX6A1P12074 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.55■□□□□ 0.4
COX6A1P12074 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.55■□□□□ 0.4
COX6A1P12074 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.54■□□□□ 0.4
COX6A1P12074 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
COX6A1P12074 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COX6A1P12074 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.54■□□□□ 0.4
COX6A1P12074 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.54■□□□□ 0.4
COX6A1P12074 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.54■□□□□ 0.4
COX6A1P12074 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.54■□□□□ 0.4
COX6A1P12074 AFG3L1P-217ENST00000557444 2447 ntBASIC17.54■□□□□ 0.4
COX6A1P12074 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COX6A1P12074 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COX6A1P12074 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.54■□□□□ 0.4
COX6A1P12074 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COX6A1P12074 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COX6A1P12074 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.54■□□□□ 0.4
COX6A1P12074 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COX6A1P12074 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.54■□□□□ 0.4
COX6A1P12074 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.54■□□□□ 0.4
COX6A1P12074 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
COX6A1P12074 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
COX6A1P12074 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
COX6A1P12074 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.53■□□□□ 0.4
COX6A1P12074 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.53■□□□□ 0.4
COX6A1P12074 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.53■□□□□ 0.4
COX6A1P12074 AL671277.2-201ENST00000458060 996 ntBASIC17.53■□□□□ 0.4
COX6A1P12074 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.53■□□□□ 0.4
COX6A1P12074 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.53■□□□□ 0.4
COX6A1P12074 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.53■□□□□ 0.4
COX6A1P12074 MIR3180-5-201ENST00000583743 153 ntBASIC17.53■□□□□ 0.4
COX6A1P12074 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
COX6A1P12074 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.53■□□□□ 0.4
COX6A1P12074 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.53■□□□□ 0.4
COX6A1P12074 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 AL358472.4-201ENST00000633140 710 ntBASIC17.53■□□□□ 0.4
COX6A1P12074 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COX6A1P12074 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.53■□□□□ 0.4
COX6A1P12074 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
COX6A1P12074 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.53■□□□□ 0.4
COX6A1P12074 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COX6A1P12074 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.53■□□□□ 0.4
COX6A1P12074 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.52■□□□□ 0.4
COX6A1P12074 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COX6A1P12074 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.52■□□□□ 0.4
COX6A1P12074 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COX6A1P12074 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COX6A1P12074 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
COX6A1P12074 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COX6A1P12074 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
COX6A1P12074 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COX6A1P12074 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
COX6A1P12074 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.52■□□□□ 0.4
COX6A1P12074 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COX6A1P12074 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COX6A1P12074 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
COX6A1P12074 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COX6A1P12074 STARP1-201ENST00000397973 869 ntBASIC17.52■□□□□ 0.4
COX6A1P12074 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COX6A1P12074 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.52■□□□□ 0.4
COX6A1P12074 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COX6A1P12074 AL121956.5-201ENST00000625261 221 ntBASIC17.52■□□□□ 0.4
COX6A1P12074 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.52■□□□□ 0.4
COX6A1P12074 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COX6A1P12074 FEM1AP3-201ENST00000403722 1741 ntBASIC17.52■□□□□ 0.39
COX6A1P12074 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.52■□□□□ 0.39
COX6A1P12074 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COX6A1P12074 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COX6A1P12074 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COX6A1P12074 IRX1P1-201ENST00000438849 1838 ntBASIC17.51■□□□□ 0.39
COX6A1P12074 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.51■□□□□ 0.39
COX6A1P12074 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COX6A1P12074 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COX6A1P12074 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
COX6A1P12074 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COX6A1P12074 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COX6A1P12074 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.51■□□□□ 0.39
COX6A1P12074 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COX6A1P12074 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.51■□□□□ 0.39
COX6A1P12074 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms