Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HMGN1P05114 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGN1P05114 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
HMGN1P05114 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGN1P05114 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
HMGN1P05114 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGN1P05114 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGN1P05114 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HMGN1P05114 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 OR6D1P-202ENST00000641007 5290 ntBASIC17.22■□□□□ 0.35
HMGN1P05114 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HMGN1P05114 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HMGN1P05114 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 AC026185.1-201ENST00000445748 174 ntBASIC17.22■□□□□ 0.35
HMGN1P05114 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.22■□□□□ 0.35
HMGN1P05114 AC092118.2-201ENST00000613495 667 ntBASIC17.22■□□□□ 0.35
HMGN1P05114 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGN1P05114 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGN1P05114 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGN1P05114 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGN1P05114 ANO7L1-203ENST00000602586 1720 ntBASIC17.21■□□□□ 0.35
HMGN1P05114 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HMGN1P05114 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGN1P05114 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGN1P05114 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HMGN1P05114 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGN1P05114 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGN1P05114 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGN1P05114 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGN1P05114 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HMGN1P05114 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGN1P05114 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGN1P05114 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
HMGN1P05114 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGN1P05114 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.21■□□□□ 0.35
HMGN1P05114 AC091874.3-201ENST00000512672 1195 ntBASIC17.21■□□□□ 0.35
HMGN1P05114 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGN1P05114 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGN1P05114 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGN1P05114 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGN1P05114 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGN1P05114 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGN1P05114 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGN1P05114 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGN1P05114 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.21■□□□□ 0.34
HMGN1P05114 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
HMGN1P05114 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
HMGN1P05114 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGN1P05114 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGN1P05114 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
HMGN1P05114 AC092368.3-202ENST00000574180 1591 ntBASIC17.2■□□□□ 0.34
HMGN1P05114 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HMGN1P05114 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HMGN1P05114 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGN1P05114 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGN1P05114 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HMGN1P05114 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGN1P05114 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HMGN1P05114 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGN1P05114 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGN1P05114 CDCA4P2-201ENST00000441182 718 ntBASIC17.2■□□□□ 0.34
HMGN1P05114 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
HMGN1P05114 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
HMGN1P05114 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.2■□□□□ 0.34
HMGN1P05114 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGN1P05114 AL121829.2-201ENST00000620908 328 ntBASIC17.2■□□□□ 0.34
HMGN1P05114 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGN1P05114 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HMGN1P05114 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HMGN1P05114 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms