Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD74P04233 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD74P04233 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.97■□□□□ 0.15
CD74P04233 AC139713.2-201ENST00000641328 2723 ntBASIC15.97■□□□□ 0.15
CD74P04233 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CD74P04233 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.97■□□□□ 0.15
CD74P04233 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.97■□□□□ 0.15
CD74P04233 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CD74P04233 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.97■□□□□ 0.15
CD74P04233 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CD74P04233 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD74P04233 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CD74P04233 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CD74P04233 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.96■□□□□ 0.15
CD74P04233 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.96■□□□□ 0.15
CD74P04233 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.96■□□□□ 0.15
CD74P04233 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.96■□□□□ 0.15
CD74P04233 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CD74P04233 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CD74P04233 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 SLC25A6P5-201ENST00000435663 894 ntBASIC15.96■□□□□ 0.15
CD74P04233 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.96■□□□□ 0.15
CD74P04233 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD74P04233 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.96■□□□□ 0.15
CD74P04233 DUX4L16-201ENST00000555130 1264 ntBASIC15.96■□□□□ 0.15
CD74P04233 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.96■□□□□ 0.15
CD74P04233 AC008694.1-202ENST00000636953 945 ntBASIC15.96■□□□□ 0.15
CD74P04233 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CD74P04233 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.96■□□□□ 0.15
CD74P04233 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CD74P04233 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.96■□□□□ 0.14
CD74P04233 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.96■□□□□ 0.14
CD74P04233 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CD74P04233 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CD74P04233 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CD74P04233 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CD74P04233 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CD74P04233 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD74P04233 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD74P04233 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.95■□□□□ 0.14
CD74P04233 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CD74P04233 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD74P04233 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD74P04233 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD74P04233 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.95■□□□□ 0.14
CD74P04233 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.95■□□□□ 0.14
CD74P04233 YBX1P10-201ENST00000444752 975 ntBASIC15.95■□□□□ 0.14
CD74P04233 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.95■□□□□ 0.14
CD74P04233 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.95■□□□□ 0.14
CD74P04233 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.95■□□□□ 0.14
CD74P04233 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.95■□□□□ 0.14
CD74P04233 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.95■□□□□ 0.14
CD74P04233 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.95■□□□□ 0.14
CD74P04233 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD74P04233 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CD74P04233 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD74P04233 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.95■□□□□ 0.14
CD74P04233 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD74P04233 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.95■□□□□ 0.14
CD74P04233 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.95■□□□□ 0.14
CD74P04233 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD74P04233 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CD74P04233 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.95■□□□□ 0.14
CD74P04233 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.95■□□□□ 0.14
CD74P04233 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD74P04233 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD74P04233 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CD74P04233 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CD74P04233 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms