Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.85■□□□□ 0.93
VTNP04004 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.85■□□□□ 0.93
VTNP04004 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.85■□□□□ 0.93
VTNP04004 NEK4P2-201ENST00000580004 1012 ntBASIC20.85■□□□□ 0.93
VTNP04004 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.85■□□□□ 0.93
VTNP04004 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.85■□□□□ 0.93
VTNP04004 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
VTNP04004 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTNP04004 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.84■□□□□ 0.93
VTNP04004 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
VTNP04004 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTNP04004 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTNP04004 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
VTNP04004 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VTNP04004 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VTNP04004 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
VTNP04004 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
VTNP04004 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTNP04004 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTNP04004 AP000523.1-201ENST00000398242 1049 ntBASIC20.84■□□□□ 0.93
VTNP04004 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.84■□□□□ 0.93
VTNP04004 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.84■□□□□ 0.93
VTNP04004 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.84■□□□□ 0.93
VTNP04004 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.84■□□□□ 0.93
VTNP04004 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.84■□□□□ 0.93
VTNP04004 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTNP04004 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTNP04004 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTNP04004 AC036111.1-201ENST00000533973 1582 ntBASIC20.84■□□□□ 0.93
VTNP04004 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTNP04004 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
VTNP04004 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VTNP04004 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.83■□□□□ 0.93
VTNP04004 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VTNP04004 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
VTNP04004 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.93
VTNP04004 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
VTNP04004 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VTNP04004 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VTNP04004 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.83■□□□□ 0.93
VTNP04004 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.83■□□□□ 0.93
VTNP04004 AL671277.2-201ENST00000458060 996 ntBASIC20.83■□□□□ 0.93
VTNP04004 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
VTNP04004 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.83■□□□□ 0.93
VTNP04004 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VTNP04004 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VTNP04004 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VTNP04004 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.83■□□□□ 0.92
VTNP04004 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VTNP04004 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VTNP04004 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
VTNP04004 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.83■□□□□ 0.92
VTNP04004 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.82■□□□□ 0.92
VTNP04004 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VTNP04004 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VTNP04004 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.82■□□□□ 0.92
VTNP04004 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VTNP04004 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.82■□□□□ 0.92
VTNP04004 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
VTNP04004 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.82■□□□□ 0.92
VTNP04004 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.82■□□□□ 0.92
VTNP04004 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.82■□□□□ 0.92
VTNP04004 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VTNP04004 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.82■□□□□ 0.92
VTNP04004 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VTNP04004 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VTNP04004 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VTNP04004 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.82■□□□□ 0.92
VTNP04004 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VTNP04004 AC073130.3-201ENST00000624389 2278 ntBASIC20.81■□□□□ 0.92
VTNP04004 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.81■□□□□ 0.92
VTNP04004 KRT8P3-201ENST00000519669 1449 ntBASIC20.81■□□□□ 0.92
VTNP04004 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 UPK3BP1-201ENST00000428678 509 ntBASIC20.81■□□□□ 0.92
VTNP04004 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.81■□□□□ 0.92
VTNP04004 FAM86EP-206ENST00000510506 987 ntBASIC20.81■□□□□ 0.92
VTNP04004 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.81■□□□□ 0.92
VTNP04004 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.81■□□□□ 0.92
VTNP04004 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.81■□□□□ 0.92
VTNP04004 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.81■□□□□ 0.92
VTNP04004 AC091076.1-201ENST00000610741 619 ntBASIC20.81■□□□□ 0.92
VTNP04004 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.81■□□□□ 0.92
VTNP04004 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.81■□□□□ 0.92
VTNP04004 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.81■□□□□ 0.92
VTNP04004 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
VTNP04004 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VTNP04004 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms