Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.11■□□□□ 0.65
PDGFBP01127 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFBP01127 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.11■□□□□ 0.65
PDGFBP01127 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.11■□□□□ 0.65
PDGFBP01127 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFBP01127 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.11■□□□□ 0.65
PDGFBP01127 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.11■□□□□ 0.65
PDGFBP01127 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFBP01127 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFBP01127 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.11■□□□□ 0.65
PDGFBP01127 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFBP01127 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFBP01127 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFBP01127 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFBP01127 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFBP01127 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.1■□□□□ 0.65
PDGFBP01127 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFBP01127 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFBP01127 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PDGFBP01127 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFBP01127 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.1■□□□□ 0.65
PDGFBP01127 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFBP01127 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDGFBP01127 RPL13AP23-201ENST00000480739 586 ntBASIC19.1■□□□□ 0.65
PDGFBP01127 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFBP01127 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.1■□□□□ 0.65
PDGFBP01127 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PDGFBP01127 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDGFBP01127 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFBP01127 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFBP01127 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFBP01127 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFBP01127 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFBP01127 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.09■□□□□ 0.65
PDGFBP01127 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFBP01127 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.09■□□□□ 0.65
PDGFBP01127 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PDGFBP01127 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFBP01127 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PDGFBP01127 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.09■□□□□ 0.65
PDGFBP01127 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.09■□□□□ 0.65
PDGFBP01127 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.09■□□□□ 0.65
PDGFBP01127 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.09■□□□□ 0.65
PDGFBP01127 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.09■□□□□ 0.65
PDGFBP01127 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.09■□□□□ 0.65
PDGFBP01127 AC027796.2-201ENST00000575326 344 ntBASIC19.09■□□□□ 0.65
PDGFBP01127 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.09■□□□□ 0.65
PDGFBP01127 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PDGFBP01127 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFBP01127 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFBP01127 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.09■□□□□ 0.65
PDGFBP01127 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDGFBP01127 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFBP01127 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFBP01127 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.08■□□□□ 0.65
PDGFBP01127 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFBP01127 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFBP01127 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDGFBP01127 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFBP01127 PMS2P2-201ENST00000425039 1128 ntBASIC19.08■□□□□ 0.64
PDGFBP01127 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.08■□□□□ 0.64
PDGFBP01127 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.08■□□□□ 0.64
PDGFBP01127 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.08■□□□□ 0.64
PDGFBP01127 AL592071.1-201ENST00000611956 408 ntBASIC19.08■□□□□ 0.64
PDGFBP01127 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.08■□□□□ 0.64
PDGFBP01127 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFBP01127 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFBP01127 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PDGFBP01127 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.08■□□□□ 0.64
PDGFBP01127 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDGFBP01127 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.08■□□□□ 0.64
PDGFBP01127 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PDGFBP01127 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
PDGFBP01127 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFBP01127 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.07■□□□□ 0.64
PDGFBP01127 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.07■□□□□ 0.64
PDGFBP01127 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PDGFBP01127 AF186996.4-201ENST00000467186 377 ntBASIC19.07■□□□□ 0.64
PDGFBP01127 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFBP01127 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.07■□□□□ 0.64
PDGFBP01127 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFBP01127 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.07■□□□□ 0.64
PDGFBP01127 MIR7706-201ENST00000613747 67 ntBASIC19.07■□□□□ 0.64
PDGFBP01127 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.07■□□□□ 0.64
PDGFBP01127 AC124864.1-201ENST00000623408 392 ntBASIC19.07■□□□□ 0.64
PDGFBP01127 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFBP01127 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PDGFBP01127 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.07■□□□□ 0.64
PDGFBP01127 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms