Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.42■□□□□ 0.7
CLDN11O75508 LIN28AP1-201ENST00000429574 405 ntBASIC19.42■□□□□ 0.7
CLDN11O75508 FAM210CP-201ENST00000445714 574 ntBASIC19.42■□□□□ 0.7
CLDN11O75508 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN11O75508 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLDN11O75508 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLDN11O75508 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN11O75508 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN11O75508 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN11O75508 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN11O75508 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLDN11O75508 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN11O75508 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLDN11O75508 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN11O75508 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN11O75508 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN11O75508 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN11O75508 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CLDN11O75508 RCN1P1-201ENST00000400413 996 ntBASIC19.41■□□□□ 0.7
CLDN11O75508 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN11O75508 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.41■□□□□ 0.7
CLDN11O75508 ATP5G1P1-201ENST00000448724 379 ntBASIC19.41■□□□□ 0.7
CLDN11O75508 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN11O75508 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN11O75508 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLDN11O75508 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
CLDN11O75508 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN11O75508 AC008622.2-201ENST00000617006 1229 ntBASIC19.41■□□□□ 0.7
CLDN11O75508 AC092865.7-201ENST00000641832 219 ntBASIC19.41■□□□□ 0.7
CLDN11O75508 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN11O75508 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN11O75508 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN11O75508 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN11O75508 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN11O75508 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLDN11O75508 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLDN11O75508 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN11O75508 AC073508.3-201ENST00000619697 1419 ntBASIC19.41■□□□□ 0.7
CLDN11O75508 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLDN11O75508 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.41■□□□□ 0.7
CLDN11O75508 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN11O75508 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN11O75508 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN11O75508 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN11O75508 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN11O75508 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLDN11O75508 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN11O75508 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CLDN11O75508 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN11O75508 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.4■□□□□ 0.7
CLDN11O75508 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN11O75508 AC010203.1-204ENST00000548782 407 ntBASIC19.4■□□□□ 0.7
CLDN11O75508 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN11O75508 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN11O75508 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLDN11O75508 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN11O75508 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN11O75508 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN11O75508 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN11O75508 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN11O75508 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN11O75508 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN11O75508 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN11O75508 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN11O75508 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.39■□□□□ 0.7
CLDN11O75508 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN11O75508 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
CLDN11O75508 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN11O75508 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN11O75508 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN11O75508 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN11O75508 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN11O75508 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN11O75508 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN11O75508 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.39■□□□□ 0.69
CLDN11O75508 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN11O75508 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN11O75508 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
CLDN11O75508 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN11O75508 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN11O75508 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN11O75508 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN11O75508 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN11O75508 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLDN11O75508 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN11O75508 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN11O75508 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN11O75508 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN11O75508 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN11O75508 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLDN11O75508 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLDN11O75508 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN11O75508 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN11O75508 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN11O75508 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CLDN11O75508 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLDN11O75508 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.38■□□□□ 0.69
CLDN11O75508 KRT18P21-201ENST00000515767 1272 ntBASIC19.38■□□□□ 0.69
CLDN11O75508 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN11O75508 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms