Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.46■□□□□ 0.55
UBFD1O14562 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
UBFD1O14562 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.46■□□□□ 0.55
UBFD1O14562 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
UBFD1O14562 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
UBFD1O14562 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 MTDHP1-201ENST00000605323 784 ntBASIC18.46■□□□□ 0.55
UBFD1O14562 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.46■□□□□ 0.55
UBFD1O14562 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UBFD1O14562 AC018470.1-201ENST00000624790 3129 ntBASIC18.46■□□□□ 0.55
UBFD1O14562 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.46■□□□□ 0.55
UBFD1O14562 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.46■□□□□ 0.55
UBFD1O14562 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 AC026471.1-201ENST00000564629 3026 ntBASIC18.46■□□□□ 0.55
UBFD1O14562 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
UBFD1O14562 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
UBFD1O14562 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.45■□□□□ 0.54
UBFD1O14562 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.45■□□□□ 0.54
UBFD1O14562 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.45■□□□□ 0.54
UBFD1O14562 AL355802.2-201ENST00000402069 882 ntBASIC18.45■□□□□ 0.54
UBFD1O14562 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.45■□□□□ 0.54
UBFD1O14562 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.45■□□□□ 0.54
UBFD1O14562 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.45■□□□□ 0.54
UBFD1O14562 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.45■□□□□ 0.54
UBFD1O14562 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.45■□□□□ 0.54
UBFD1O14562 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.45■□□□□ 0.54
UBFD1O14562 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.45■□□□□ 0.54
UBFD1O14562 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
UBFD1O14562 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBFD1O14562 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.45■□□□□ 0.54
UBFD1O14562 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBFD1O14562 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBFD1O14562 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBFD1O14562 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBFD1O14562 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBFD1O14562 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBFD1O14562 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.44■□□□□ 0.54
UBFD1O14562 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.44■□□□□ 0.54
UBFD1O14562 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.44■□□□□ 0.54
UBFD1O14562 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.44■□□□□ 0.54
UBFD1O14562 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBFD1O14562 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.44■□□□□ 0.54
UBFD1O14562 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.44■□□□□ 0.54
UBFD1O14562 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.44■□□□□ 0.54
UBFD1O14562 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBFD1O14562 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBFD1O14562 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.44■□□□□ 0.54
UBFD1O14562 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.44■□□□□ 0.54
UBFD1O14562 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBFD1O14562 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.44■□□□□ 0.54
UBFD1O14562 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
UBFD1O14562 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBFD1O14562 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
UBFD1O14562 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBFD1O14562 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
UBFD1O14562 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.43■□□□□ 0.54
UBFD1O14562 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.43■□□□□ 0.54
UBFD1O14562 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.43■□□□□ 0.54
UBFD1O14562 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBFD1O14562 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBFD1O14562 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBFD1O14562 ID1-201ENST00000376105 1233 ntBASIC18.43■□□□□ 0.54
UBFD1O14562 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBFD1O14562 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.43■□□□□ 0.54
UBFD1O14562 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.43■□□□□ 0.54
UBFD1O14562 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
UBFD1O14562 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBFD1O14562 AC069544.1-201ENST00000609399 999 ntBASIC18.43■□□□□ 0.54
UBFD1O14562 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.43■□□□□ 0.54
UBFD1O14562 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBFD1O14562 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBFD1O14562 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBFD1O14562 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms